RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 ADAM8P78325 824 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 PCGF3Q3KNV8 242 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 ZNF626Q68DY1 528 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 MAMSTRQ6ZN01 415 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 KMT5CQ86Y97 462 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 C8orf44Q96CB5 159 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 SEC22CQ9BRL7 303 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 MGAT4CQ9UBM8 478 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 ZNF69Q9UC07 566 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 PCDHGA5Q9Y5G8 931 aa19.13■□□□□ 0.65
VPS28-205ENST00000526204 A0A1W2PQ72 361 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 LEUTXA8MZ59 168 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 GIPP09681 153 aaPredicted RBP19.12■□□□□ 0.65
VPS28-205ENST00000526204 POU3F4P49335 361 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 RIDAP52758 137 aaKnown RBP19.12■□□□□ 0.65
VPS28-205ENST00000526204 CFHR1Q03591 330 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 GLO1Q04760 184 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 TOMM20Q15388 145 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 RBMS2Q15434 407 aaKnown RBP19.12■□□□□ 0.65
VPS28-205ENST00000526204 FAAP20Q6NZ36 180 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 PLPP5Q8NEB5 264 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 TMEM234Q8WY98 164 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 ATOH1Q92858 354 aaPredicted RBP19.12■□□□□ 0.65
VPS28-205ENST00000526204 CKLFQ9UBR5 152 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 LOC100289279A0A1B0GTE1 492 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 G3V3Q6 166 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 WISP1O95388 367 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 CD2P06729 351 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 CTLA4P16410 223 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 PLA2G7Q13093 441 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 C1orf189Q5VU69 101 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 ZNF248Q8NDW4 579 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 OR6S1Q8NH40 331 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 DUSP19Q8WTR2 217 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 FAM3DQ96BQ1 224 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 DHDHQ9UQ10 334 aa19.12■□□□□ 0.65
VPS28-205ENST00000526204 BRWD1Q9NSI6 2320 aa19.11■□□□□ 0.65
VPS28-205ENST00000526204 ITGA5P08648 1049 aa19.11■□□□□ 0.65
VPS28-205ENST00000526204 ANXA7P20073 488 aaKnown RBP19.11■□□□□ 0.65
VPS28-205ENST00000526204 RAP2BP61225 183 aa19.11■□□□□ 0.65
VPS28-205ENST00000526204 SSBP1Q04837 148 aaKnown RBP19.11■□□□□ 0.65
VPS28-205ENST00000526204 FTMTQ8N4E7 242 aa19.11■□□□□ 0.65
VPS28-205ENST00000526204 ZNF587Q96SQ5 575 aaPredicted RBP19.11■□□□□ 0.65
VPS28-205ENST00000526204 DPCDQ9BVM2 203 aaPredicted RBP19.11■□□□□ 0.65
VPS28-205ENST00000526204 GTF2A1LQ9UNN4 478 aa19.11■□□□□ 0.65
VPS28-205ENST00000526204 SLC22A13Q9Y226 551 aa19.11■□□□□ 0.65
VPS28-205ENST00000526204 GON4LQ3T8J9 2241 aa19.11■□□□□ 0.65
VPS28-205ENST00000526204 H3BSH0 61 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 TOXO94900 526 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 PNPP00491 289 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 GLB1P16278 677 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 SLC26A5P58743 744 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 PSMA6P60900 246 aaKnown RBP19.1■□□□□ 0.65
VPS28-205ENST00000526204 EIF2B1Q14232 305 aaKnown RBP19.1■□□□□ 0.65
VPS28-205ENST00000526204 C2orf76Q3KRA6 126 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 PRSS42Q7Z5A4 293 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 UXS1Q8NBZ7 420 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 FOXN4Q96NZ1 517 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 ABHD6Q9BV23 337 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 PHF7Q9BWX1 381 aaPredicted RBP19.1■□□□□ 0.65
VPS28-205ENST00000526204 AUP1Q9Y679 476 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 A6NIZ1 184 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 OR2A4O95047 310 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 SSTR2P30874 369 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 EFNB2P52799 333 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 RAP1BP61224 184 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 TSPAN5P62079 268 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 RAP1AP62834 184 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 DHODHQ02127 395 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 GLT8D1Q68CQ7 371 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 FAM166AQ6J272 317 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.1■□□□□ 0.65
VPS28-205ENST00000526204 CATSPERDQ86XM0 798 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 OR2A7Q96R45 310 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 OR11A1Q9GZK7 315 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 UBQLN2Q9UHD9 624 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 CA14Q9ULX7 337 aa19.1■□□□□ 0.65
VPS28-205ENST00000526204 COL5A1P20908 1838 aaPredicted RBP19.1■□□□□ 0.65
VPS28-205ENST00000526204 CIB4A0PJX0 185 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 CCDC85CA6NKD9 419 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 CSF2RBP32927 897 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 PRSS3P35030 304 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 CSNK1EP49674 416 aaKnown RBP19.09■□□□□ 0.65
VPS28-205ENST00000526204 MAP2K6P52564 334 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 PUDPQ08623 228 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 CAMK2BQ13554 666 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 MFSD13AQ14CX5 517 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 TMEM225Q6GV28 225 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 NDUFAF7Q7L592 441 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 OR4C16Q8NGL9 310 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 OR52N5Q8NH56 324 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 ASB5Q8WWX0 329 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 MARVELD3Q96A59 401 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 ZNF501Q96CX3 271 aaPredicted RBP19.09■□□□□ 0.65
VPS28-205ENST00000526204 CHIAQ9BZP6 476 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 FGF21Q9NSA1 209 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 MRPS17Q9Y2R5 130 aaKnown RBP19.09■□□□□ 0.65
VPS28-205ENST00000526204 TRAV18A0A075B6X5 111 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 UBE2QL1A1L167 161 aa19.09■□□□□ 0.65
VPS28-205ENST00000526204 MBTPS2O43462 519 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms