RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 NKAIN4Q8IVV8 208 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ZNF440Q8IYI8 595 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ZNF100Q8IYN0 542 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 UBE2J2Q8N2K1 259 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ADAMTS16Q8TE57 1224 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TMEM255BQ8WV15 326 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 IGFBPL1Q8WX77 278 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 HTRA1Q92743 480 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TAAR8Q969N4 342 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ZHX1-C8orf76Q96EF9 292 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 SLC41A3Q96GZ6 507 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ZNF385AQ96PM9 386 aaKnown RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 HIST1H2AAQ96QV6 131 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 CDRT15Q96T59 188 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 SH3GL1Q99961 368 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 PSD2Q9BQI7 771 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ZNF559Q9BR84 538 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 MED18Q9BUE0 208 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TAPBPLQ9BX59 468 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TMEM27Q9HBJ8 222 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TIGARQ9NQ88 270 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TMEM45AQ9NWC5 275 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TMEM181Q9P2C4 612 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 DNAJB11Q9UBS4 358 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 ITGB1BP2Q9UKP3 347 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 MRPS18CQ9Y3D5 142 aaKnown RBP4.53□□□□□ -1.68
SVIP-202ENST00000525670 CCDC168Q8NDH2 2452 aa4.53□□□□□ -1.68
SVIP-202ENST00000525670 TUBAL3A6NHL2 446 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 LIPT2A6NK58 231 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 ENO4A6NNW6 628 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 ZNF716A6NP11 495 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 A8MVM7 634 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 ARPC2O15144 300 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 HNRNPRO43390 633 aaKnown RBP4.52□□□□□ -1.69
SVIP-202ENST00000525670 CYTIPO60759 359 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 LGI1O95970 557 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 CH25HO95992 272 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 HPRP00739 348 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 ADAP00813 363 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 GPIP06744 558 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 HOXD4P09016 255 aaPredicted RBP4.52□□□□□ -1.69
SVIP-202ENST00000525670 HLA-DOBP13765 273 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 GGT1P19440 569 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 AHCYP23526 432 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 IL32P24001 234 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 PRDX6P30041 224 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 KDELR2P33947 212 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 GPR4P46093 362 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 HTR3AP46098 478 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 TUBA1BP68363 451 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 CSNK2A1P68400 391 aaPredicted RBP4.52□□□□□ -1.69
SVIP-202ENST00000525670 SLC35A1P78382 337 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 SPIBQ01892 262 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 POU3F1Q03052 451 aaPredicted RBP4.52□□□□□ -1.69
SVIP-202ENST00000525670 EGR4Q05215 589 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 PPP1R8Q12972 351 aaKnown RBP4.52□□□□□ -1.69
SVIP-202ENST00000525670 SF3B4Q15427 424 aaKnown RBP eCLIP4.52□□□□□ -1.69
SVIP-202ENST00000525670 BCL2A1Q16548 175 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 OR2A2Q6IF42 318 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 NIPAL3Q6P499 406 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 ERICH5Q6P6B1 374 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 C16orf89Q6UX73 402 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 CLEC9AQ6UXN8 241 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 TFAP2EQ6VUC0 442 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 COLCA1Q6ZS62 124 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 TUBA1AQ71U36 451 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 WDFY1Q8IWB7 410 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 PGAM4Q8N0Y7 254 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 LRRC17Q8N6Y2 441 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 OR9K2Q8NGE7 335 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 OR6K3Q8NGY3 331 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 OR52J3Q8NH60 311 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 PIGXQ8TBF5 258 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 RNASE6Q93091 150 aaKnown RBP4.52□□□□□ -1.69
SVIP-202ENST00000525670 PIK3IP1Q96FE7 263 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 GMPPAQ96IJ6 420 aaPredicted RBP4.52□□□□□ -1.69
SVIP-202ENST00000525670 SEPHS2Q99611 448 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 EMC6Q9BV81 110 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 C1QTNF6Q9BXI9 259 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 TRIM2Q9C040 744 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 ACTR6Q9GZN1 396 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 NUAK2Q9H093 628 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 FAM234AQ9H0X4 552 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 CHST11Q9NPF2 352 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 MED29Q9NX70 200 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 KLHL9Q9P2J3 617 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 ABCD2Q9UBJ2 740 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 SLC9A8Q9Y2E8 581 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 NOSIPQ9Y314 301 aaKnown RBP4.52□□□□□ -1.69
SVIP-202ENST00000525670 KLF2Q9Y5W3 355 aaPredicted RBP4.52□□□□□ -1.69
SVIP-202ENST00000525670 ROS1P08922 2347 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 CELSR1Q9NYQ6 3014 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 ABCA4P78363 2273 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 SPG11Q96JI7 2443 aa4.52□□□□□ -1.69
SVIP-202ENST00000525670 MAP1AP78559 2803 aaPredicted RBP4.51□□□□□ -1.69
SVIP-202ENST00000525670 TRAV36DV7A0A075B6V5 113 aa4.51□□□□□ -1.69
SVIP-202ENST00000525670 TRAV27A0A087WT01 109 aa4.51□□□□□ -1.69
SVIP-202ENST00000525670 TRAPPC13A5PLN9 417 aa4.51□□□□□ -1.69
SVIP-202ENST00000525670 H7C1C5 153 aa4.51□□□□□ -1.69
SVIP-202ENST00000525670 SYT5O00445 386 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms