RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 C16orf62Q7Z3J2 963 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 GALNT4Q8N4A0 578 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 SLC22A24Q8N4F4 322 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 CPEB3Q8NE35 698 aaKnown RBP7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 OR4S1Q8NGB4 309 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 OR1J1Q8NGS3 322 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 KLF14Q8TD94 323 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 XAGE5Q8WWM1 108 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 ROPN1LQ96C74 230 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 COQ8BQ96D53 544 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 THOC1Q96FV9 657 aaKnown RBP7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 MAP6Q96JE9 813 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 SAMD8Q96LT4 415 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 SEMA6AQ9H2E6 1030 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 DPH5Q9H2P9 285 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 CNTD2Q9H8S5 307 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 NANOGQ9H9S0 305 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 NKX1-2Q9UD57 310 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 VPREB3Q9UKI3 123 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 FBXL3Q9UKT7 428 aa7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 SF3B6Q9Y3B4 125 aaKnown RBP7.29□□□□□ -1.24
TRAPPC9-212ENST00000521944 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 P2RY10O00398 339 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 LSM1O15116 133 aaKnown RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 INHBAP08476 426 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 NHLRC4P0CG21 123 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 RPS2P15880 293 aaKnown RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 RPS4Y1P22090 263 aaKnown RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 KIR2DS4P43632 304 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 RPS5P46782 204 aaKnown RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 RPL38P63173 70 aaKnown RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 EMX1Q04741 257 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 C1DQ13901 141 aaKnown RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 MRPL2Q5T653 305 aaKnown RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 WDR25Q64LD2 544 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 ZDHHC24Q6UX98 284 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 LYPD2Q6UXB3 125 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 PIWIL3Q7Z3Z3 882 aaKnown RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 SLC35F6Q8N357 371 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 KRTCAP2Q8N6L1 136 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 SLC25A40Q8TBP6 338 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 PNPT1Q8TCS8 783 aaKnown RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 WIPF2Q8TF74 440 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 TAAR8Q969N4 342 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 MOAP1Q96BY2 351 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 CCDC126Q96EE4 140 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 TMEM246Q9BRR3 403 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 TRIM15Q9C019 465 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 OR2J1Q9GZK6 312 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 SLC38A1Q9H2H9 487 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 DPAGT1Q9H3H5 408 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 CDH20Q9HBT6 801 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 POLE3Q9NRF9 147 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 ZDHHC8Q9ULC8 765 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 PPP2R2CQ9Y2T4 447 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 CHST2Q9Y4C5 530 aa7.28□□□□□ -1.24
TRAPPC9-212ENST00000521944 PLSCR5A0PG75 271 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 TMEM82A0PJX8 343 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZNF879B4DU55 563 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 SHOXO15266 292 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 TOX4O94842 621 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 MMP7P09237 267 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 CD247P20963 164 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 CPT2P23786 658 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ATP5F1P24539 256 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 HOXD3P31249 432 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 PTGR1Q14914 329 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 MLANAQ16655 118 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 SMU1Q2TAY7 513 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZNF718Q3SXZ3 478 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 FAM201AQ5SY85 155 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 TNFAIP8L2Q6P589 184 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZCCHC23Q6ZST2 131 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 H1FNTQ75WM6 255 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 RNF144BQ7Z419 303 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 RIMKLAQ8IXN7 391 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 PDZD9Q8IXQ8 264 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 CLECL1Q8IZS7 167 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ANKFN1Q8N957 763 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ITLN1Q8WWA0 313 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 LHX4Q969G2 390 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ANAPC16Q96DE5 110 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 RBMXL1Q96E39 390 aaKnown RBP7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 NEIL1Q96FI4 390 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 WDFY2Q96P53 400 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 CITED2Q99967 270 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ERP44Q9BS26 406 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ULBP2Q9BZM5 246 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 SIRPDQ9H106 197 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 PPA2Q9H2U2 334 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 GCM1Q9NP62 436 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 EXD2Q9NVH0 621 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZNRD1Q9P1U0 126 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 GIMAP2Q9UG22 337 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 MIOXQ9UGB7 285 aa7.27□□□□□ -1.25
TRAPPC9-212ENST00000521944 IGKV1D-42A0A075B6H8 117 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 LOC100509620A0A075B734 347 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 SLC28A1O00337 649 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 NPHS1O60500 1241 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 FCN3O75636 299 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms