RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 TMEM154Q6P9G4 183 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 RP9Q8TA86 221 aaKnown RBP13.57□□□□□ -0.24
CLN8-205ENST00000520991 ZNF519Q8TB69 540 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 SYNPRQ8TBG9 265 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 C11orf40Q8WZ69 217 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 HDAC2Q92769 488 aaKnown RBP13.57□□□□□ -0.24
CLN8-205ENST00000520991 FNDC11Q9BVV2 318 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 BCL2L14Q9BZR8 327 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 TXNIPQ9H3M7 391 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 SIAEQ9HAT2 523 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 SMURF2Q9HAU4 748 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 ZNF446Q9NWS9 450 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 CMTM6Q9NX76 183 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 A4GNTQ9UNA3 340 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 HIF3AQ9Y2N7 669 aa13.57□□□□□ -0.24
CLN8-205ENST00000520991 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.244e-15■■■■□ 21.5
CLN8-205ENST00000520991 STAB1Q9NY15 2570 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 GSTA4O15217 222 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 ZNF682O95780 498 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 CLPTM1O96005 669 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 MMP7P09237 267 aaPredicted RBP13.56□□□□□ -0.24
CLN8-205ENST00000520991 DRD4P21917 467 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 CCNOP22674 350 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 COL8A2P25067 703 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 YAP1P46937 504 aaKnown RBP13.56□□□□□ -0.24
CLN8-205ENST00000520991 ZNF133P52736 654 aaPredicted RBP13.56□□□□□ -0.24
CLN8-205ENST00000520991 CDH15P55291 814 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 UCP2P55851 309 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 ERVS71-1P61550 626 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 FMODQ06828 376 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 TAF11Q15544 211 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 SGCAQ16586 387 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 PABPC1L2AQ5JQF8 200 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 VTCN1Q7Z7D3 282 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 IGFN1Q86VF2 1251 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 GEMIN6Q8WXD5 167 aaKnown RBP13.56□□□□□ -0.24
CLN8-205ENST00000520991 ALG12Q9BV10 488 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 CCDC134Q9H6E4 229 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 NARFLQ9H6Q4 476 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 HINT3Q9NQE9 182 aaKnown RBP13.56□□□□□ -0.24
CLN8-205ENST00000520991 SLCO1C1Q9NYB5 712 aa13.56□□□□□ -0.24
CLN8-205ENST00000520991 IGKV1D-43A0A0B4J1Z2 117 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 PPIHO43447 177 aaKnown RBP13.55□□□□□ -0.24
CLN8-205ENST00000520991 NCR1O76036 304 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 COX4I1P13073 169 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 ZNF250P15622 560 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 ZNF32P17041 273 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 GUCA1AP43080 201 aaPredicted RBP13.55□□□□□ -0.24
CLN8-205ENST00000520991 CTXN1P60606 82 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 RPL27P61353 136 aaKnown RBP13.55□□□□□ -0.24
CLN8-205ENST00000520991 MRPS11P82912 194 aaKnown RBP13.55□□□□□ -0.24
CLN8-205ENST00000520991 LIPEQ05469 1076 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 TRAM2Q15035 370 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 THEM4Q5T1C6 240 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 FAM205BPQ63HN1 556 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 NRMQ8IXM6 262 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 SLC15A3Q8IY34 581 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 OFCC1Q8IZS5 231 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 OR1J1Q8NGS3 322 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 YIPF5Q969M3 257 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 NABP1Q96AH0 204 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 TSPAN32Q96QS1 320 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 RBP7Q96R05 134 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 ZNF416Q9BWM5 594 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 ZNF275Q9NSD4 429 aaPredicted RBP13.55□□□□□ -0.24
CLN8-205ENST00000520991 GMPR2Q9P2T1 348 aaKnown RBP13.55□□□□□ -0.24
CLN8-205ENST00000520991 RHCGQ9UBD6 479 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 TMEFF2Q9UIK5 374 aaPredicted RBP13.55□□□□□ -0.24
CLN8-205ENST00000520991 UGT2A1Q9Y4X1 527 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 FBN3Q75N90 2809 aa13.55□□□□□ -0.24
CLN8-205ENST00000520991 IGLV3-9A0A075B6K5 115 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 TRAV27A0A087WT01 109 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 C17orf100A8MU93 164 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 EFCAB9A8MZ26 197 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 J3KTA2 159 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 CXCR6O00574 342 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 CCDC22O60826 627 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 IGHMP01871 453 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 MT-ND5P03915 603 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 MAKP20794 623 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 PCMT1P22061 227 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 STOMP27105 288 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 SRP14P37108 136 aaKnown RBP13.54□□□□□ -0.24
CLN8-205ENST00000520991 MAGEB1P43366 347 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 SLC7A2P52569 658 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 TMEM33P57088 247 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 ERVK-25P63136 954 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 MOGQ16653 247 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 PCGF3Q3KNV8 242 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 IFI44LQ53G44 452 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 SLC25A47Q6Q0C1 308 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 ZNF730Q6ZMV8 503 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 FKBP9P1Q75LS8 142 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 OAFQ86UD1 273 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 MEX3DQ86XN8 651 aaKnown RBP13.54□□□□□ -0.24
CLN8-205ENST00000520991 CPEB3Q8NE35 698 aaKnown RBP13.54□□□□□ -0.24
CLN8-205ENST00000520991 OR51A7Q8NH64 312 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 AKR7LQ8NHP1 331 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 FNDC8Q8TC99 324 aa13.54□□□□□ -0.24
CLN8-205ENST00000520991 NMD3Q96D46 503 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms