RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 NSG1A0A0A6YYJ2 146 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 A8MVM7 634 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 F8W036 122 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 GABRG2P18507 467 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 NFYAP23511 347 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-204ENST00000519664 CLDN6P56747 220 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 BLOC1S1P78537 153 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 RHOUQ7L0Q8 258 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 RAB11FIP2Q7L804 512 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 CMTM4Q8IZR5 234 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 TTC9Q92623 222 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF845Q96IR2 970 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-204ENST00000519664 MRI1Q9BV20 369 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 STRADBQ9C0K7 418 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 BANF2Q9H503 90 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 EHFQ9NZC4 300 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 PISDQ9UG56 409 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 E9PI62 339 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 NRG2O14511 850 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-204ENST00000519664 MOSPD3O75425 235 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 LALBAP00709 142 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 PET100P0DJ07 73 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 COL9A1P20849 921 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 FASLGP48023 281 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 RAP2BP61225 183 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 C17orf67Q0P5P2 114 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 YIF1BQ5BJH7 314 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 WDSUB1Q8N9V3 476 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 PIGCQ92535 297 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 SPTSSAQ969W0 71 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 SLC25A19Q9HC21 320 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 FAM60AQ9NP50 221 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 A0A1B0GTH9 108 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 RAB19A4D1S5 217 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 HSPB6O14558 160 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 CD27P26842 260 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 CCR9P51686 369 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 TEKQ02763 1124 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 NKAIN1Q4KMZ8 207 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 C14orf28Q4W4Y0 310 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 C16orf47Q6ZP98 133 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-204ENST00000519664 TMPPEQ6ZT21 453 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 PRSS42Q7Z5A4 293 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF680Q8NEM1 530 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 STT3BQ8TCJ2 826 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 PAQR8Q8TEZ7 354 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 FGF20Q9NP95 211 aaPredicted RBP10.68□□□□□ -0.7
SYNPO-204ENST00000519664 EMC7Q9NPA0 242 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 GPANK1O95872 356 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 SOD1P00441 154 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 OR8U9P0C7N5 309 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 CAPZA1P52907 286 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 SSX2Q16385 188 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 IGSF11Q5DX21 431 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 SLC16A9Q7RTY1 509 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 TCTE3Q8IZS6 198 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 OR6V1Q8N148 313 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 OR2A5Q96R48 311 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 PRRT1Q99946 306 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF175Q9Y473 711 aa10.68□□□□□ -0.7
SYNPO-204ENST00000519664 TMEM235A6NFC5 223 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 OR7C1O76099 320 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 CALCBP10092 127 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 GDF1P27539 372 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 DCTDP32321 178 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 GPR85P60893 370 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 IFITM3Q01628 133 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 TFF2Q03403 129 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 CDK5R1Q15078 307 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 PLEKHN1Q494U1 663 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 PTCRAQ6ISU1 281 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 UNQ6126/PRO20091Q6UXV3 157 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 SVBPQ8N300 66 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 IL1F10Q8WWZ1 152 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 ASB17Q8WXJ9 295 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 KIAA1143Q96AT1 154 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 A0A0A6YYJ9 748 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 BORCS7-ASMTA0A0B4J1R7 106 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 ARRDC5A6NEK1 342 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 CT62P0C5K7 136 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 BDKRB2P30411 391 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 GZMMP51124 257 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 AKR1C2P52895 323 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 DCDP81605 110 aaKnown RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 ELAVL1Q15717 326 aaKnown RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 MANEAQ5SRI9 462 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 TMEM92Q6UXU6 159 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 UBE3DQ7Z6J8 389 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 ANGPTL5Q86XS5 388 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 C17orf47Q8NEP4 570 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 MIB2Q96AX9 1013 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 FCRL1Q96LA6 429 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF578Q96N58 590 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 PTDSS2Q9BVG9 487 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 NSA2O95478 260 aaKnown RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 RAF1P04049 648 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 EPHA1P21709 976 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 DPP4P27487 766 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 BLVRBP30043 206 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 FOLR3P41439 243 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms