RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 TOMM20Q15388 145 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 INAQ16352 499 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 SNAPC1Q16533 368 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 BCL2A1Q16548 175 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 FBLN7Q53RD9 439 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 PRR30Q53SZ7 412 aaPredicted RBP6.09□□□□□ -1.43
CPS1-210ENST00000518043 LINC01590Q5TEZ4 76 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 KRT80Q6KB66 452 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 ARHGAP11AQ6P4F7 1023 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 PAQR6Q6TCH4 344 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 FAM180AQ6UWF9 173 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 B3GNT6Q6ZMB0 384 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 PXKQ7Z7A4 578 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 ZGRF1Q86YA3 2104 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 CPOQ8IVL8 374 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 ZNF786Q8N393 782 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 CYB561A3Q8NBI2 242 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 SDR9C7Q8NEX9 313 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 OR52L1Q8NGH7 329 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 OR4K13Q8NH42 304 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 OR10D3Q8NH80 312 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 TRUB1Q8WWH5 349 aaKnown RBP6.09□□□□□ -1.43
CPS1-210ENST00000518043 ASB10Q8WXI3 467 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 TM9SF4Q92544 642 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 GGHQ92820 318 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 PNPLA2Q96AD5 504 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 LRR1Q96L50 414 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 C20orf173Q96LM9 149 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 ERMAPQ96PL5 475 aaPredicted RBP6.09□□□□□ -1.43
CPS1-210ENST00000518043 TIMP4Q99727 224 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 ZNF649Q9BS31 505 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 TXNIPQ9H3M7 391 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 MSL2Q9HCI7 577 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 AMBNQ9NP70 447 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 INIPQ9NRY2 104 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 MED29Q9NX70 200 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 PSORS1C1Q9UIG5 152 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 ZNF346Q9UL40 294 aaKnown RBP6.09□□□□□ -1.43
CPS1-210ENST00000518043 B3GNT3Q9Y2A9 372 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 B3GALT5Q9Y2C3 310 aa6.09□□□□□ -1.43
CPS1-210ENST00000518043 NCOA6Q14686 2063 aaPredicted RBP6.09□□□□□ -1.43
CPS1-210ENST00000518043 SPENQ96T58 3664 aaKnown RBP6.09□□□□□ -1.43
CPS1-210ENST00000518043 BOD1L1Q8NFC6 3051 aa6.09□□□□□ -1.44
CPS1-210ENST00000518043 PHF3Q92576 2039 aaKnown RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 IGLV1-36A0A0B4J1U3 117 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 TRGV5A0A0B4J1U4 118 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 IGKV1D-43A0A0B4J1Z2 117 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 NPIPA5E9PKD4 350 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 J3QRE1 110 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 TFECO14948 347 aaPredicted RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 IDH3BO43837 385 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 MPZL2O60487 215 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 AQP8O94778 261 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 ZNF432O94892 652 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 ACTL6AO96019 429 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 DBTP11182 482 aaKnown RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 CPN1P15169 458 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 EDNRAP25101 427 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 ACVR2AP27037 513 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 RPL4P36578 427 aaKnown RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 SLC25A1P53007 311 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 SLC16A1P53985 500 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 GABARAPL2P60520 117 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 RPL27P61353 136 aaKnown RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 POU3F1Q03052 451 aaPredicted RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 MELKQ14680 651 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 SLC17A1Q14916 467 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 SLC10A1Q14973 349 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 RBM48Q5RL73 367 aaKnown RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 NXNL2Q5VZ03 156 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 HBMQ6B0K9 141 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 PLBD1Q6P4A8 553 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 CASP12Q6UXS9 341 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 B3GLCTQ6Y288 498 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 SLC35D2Q76EJ3 337 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 UBQLNLQ8IYU4 475 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 CMTM4Q8IZR5 234 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 TMEM123Q8N131 208 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 GHDCQ8N2G8 530 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 ARIH2OSQ8N7S6 290 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 OR9K2Q8NGE7 335 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 OR52E2Q8NGJ4 325 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 OR9Q1Q8NGQ5 310 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 C9orf43Q8TAL5 461 aaPredicted RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 RNF128Q8TEB7 428 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 ROBO4Q8WZ75 1007 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 ABTB1Q969K4 478 aaPredicted RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 OXGR1Q96P68 337 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 ZNF385AQ96PM9 386 aaKnown RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 SLC38A2Q96QD8 506 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 SNX18Q96RF0 628 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 NMNAT3Q96T66 252 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 TUBA1CQ9BQE3 449 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 SSBP3Q9BWW4 388 aaPredicted RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 MRPL13Q9BYD1 178 aaKnown RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 YTHDF1Q9BYJ9 559 aaKnown RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 NELFAQ9H3P2 528 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 TCF7L1Q9HCS4 588 aa6.08□□□□□ -1.44
CPS1-210ENST00000518043 ZNF71Q9NQZ8 489 aaPredicted RBP6.08□□□□□ -1.44
CPS1-210ENST00000518043 MRPS18AQ9NVS2 196 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms