RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RAB7AP51149 207 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 NOVA1P51513 510 aaKnown RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 LUMP51884 338 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 DGKEP52429 567 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 AKR1C2P52895 323 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CRISP1P54107 249 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 EMP2P54851 167 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 FGF8P55075 233 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 UFM1P61960 85 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 RPS8P62241 208 aaKnown RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H3AP68431 136 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PSG6Q00889 435 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PAX5Q02548 391 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SSBP1Q04837 148 aaKnown RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL24Q13007 206 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLAQ13239 276 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 MADCAM1Q13477 382 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ENPP2Q13822 863 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 KLF9Q13886 244 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 RBM39Q14498 530 aaKnown RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF235Q14590 738 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC17A1Q14916 467 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 DECR1Q16698 335 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SPDYE7PQ495Y7 208 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CARD16Q5EG05 197 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 C1orf220Q5T0J3 134 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM268Q5VZI3 342 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR2T2Q6IF00 324 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR2A2Q6IF42 318 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRR27Q6MZM9 219 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 MRNIPQ6NTE8 343 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 C11orf87Q6NUJ2 197 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PSRC1Q6PGN9 363 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CRIP3Q6Q6R5 217 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 WDR88Q6ZMY6 472 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF705AQ6ZN79 300 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM91Q6ZNR0 172 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMIM5Q71RC9 77 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OVCH1Q7RTY7 1134 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TRMT1LQ7Z2T5 733 aaKnown RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMED4Q7Z7H5 227 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 LRRTM1Q86UE6 522 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 GLB1L2Q8IW92 636 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TCEAL8Q8IYN2 117 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 GPR135Q8IZ08 494 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 H1FOOQ8IZA3 346 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 GPD1LQ8N335 351 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM24BQ8N5W8 94 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR4S1Q8NGB4 309 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR10G2Q8NGC3 310 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR4K5Q8NGD3 323 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR51D1Q8NGF3 324 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR5L1Q8NGL2 311 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF596Q8TC21 504 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 STT3BQ8TCJ2 826 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PROKR1Q8TCW9 393 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 RXFP2Q8WXD0 754 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 NT5C3BQ969T7 300 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM106AQ96A25 262 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 RPUSD4Q96CM3 377 aaKnown RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PPP1R16AQ96I34 528 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC35E1Q96K37 410 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 WDR92Q96MX6 357 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR8B4Q96RC9 309 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TAAR6Q96RI8 345 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PEBP4Q96S96 227 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 FEVQ99581 238 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 HSD17B14Q9BPX1 270 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 C20orf144Q9BQM9 153 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PDCD2LQ9BRP1 358 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TRMT61BQ9BVS5 477 aaKnown RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 DUSP16Q9BY84 665 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACTRT3Q9BYD9 372 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 DPY30Q9C005 99 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SRMSQ9H3Y6 488 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PLK3Q9H4B4 646 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CSNK1G1Q9HCP0 422 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 AMBNQ9NP70 447 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACKR4Q9NPB9 350 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 LTB4R2Q9NPC1 389 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 KCNJ16Q9NPI9 418 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF302Q9NR11 478 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 PARP11Q9NR21 331 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CUTCQ9NTM9 273 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM242Q9NWH2 141 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLEC5AQ9NY25 188 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ASIC5Q9NY37 505 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR5AC2Q9NZP5 309 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CACNG4Q9UBN1 327 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMPXQ9UHP9 88 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CDC42EP3Q9UKI2 254 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TSPAN16Q9UKR8 245 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 TNFSF18Q9UNG2 199 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 NEU3Q9UQ49 428 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 ENTPD2Q9Y5L3 495 aa4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 CFAP20Q9Y6A4 193 aaKnown RBP4.37□□□□□ -1.71
HMGB1P19-201ENST00000517578 BAZ2BQ9UIF8 2168 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 NPIPA5A0A0B4J1W7 369 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 KIR2DL5BA0A0G2JN68 375 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 KIR2DL5BA0A0G2JPC4 375 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms