RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 INTS12Q96CB8 462 aaKnown RBP6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZNF385AQ96PM9 386 aaKnown RBP6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 OR2M2Q96R28 347 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TTYH2Q9BSA4 534 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CENPOQ9BU64 300 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PRRG4Q9BZD6 226 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 DCSTAMPQ9H295 470 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CXorf56Q9H5V9 222 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 KLHL9Q9P2J3 617 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 KCNG2Q9UJ96 466 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 IKZF2Q9UKS7 526 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 MCTS1Q9ULC4 181 aaKnown RBP6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 RCE1Q9Y256 329 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 KLHDC2Q9Y2U9 406 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LIPGQ9Y5X9 500 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZFHX4Q86UP3 3567 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 DCHS1Q96JQ0 3298 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CEP295Q9C0D2 2601 aa6.79□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CACNA1CQ13936 2221 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CELSR3Q9NYQ7 3312 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ASPMQ8IZT6 3477 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 IGKV1D-43A0A0B4J1Z2 117 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TRDV1A0A1B0GX56 115 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 METTL15A6NJ78 407 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 E9PI62 339 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PSMD9O00233 223 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 GPR171O14626 319 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 MAGEB4O15481 346 aaPredicted RBP6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 OGG1O15527 345 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PLPP2O43688 288 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TMCC2O75069 709 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SLC43A1O75387 559 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SULT1C4O75897 302 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZNF432O94892 652 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 MPZL1O95297 269 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 IGHG3P01860 377 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 HLA-DPB1P04440 258 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 OR8G3PP0DMU2 310 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 GAAP10253 952 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CPN1P15169 458 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CD53P19397 219 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LAP3P28838 519 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 RPS27P42677 84 aaKnown RBP6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 GUCA1AP43080 201 aaPredicted RBP6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CRYBB2P43320 205 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SERPINB10P48595 397 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TGM4P49221 684 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SELENOPP49908 381 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TUBA1BP68363 451 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SIRPAP78324 504 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SLC3A1Q07837 685 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LSAMPQ13449 338 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TRAM1Q15629 374 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 HIST3H3Q16695 136 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 MEP1BQ16820 701 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 DGUOKQ16854 277 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CCDC58Q4VC31 144 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SOWAHCQ53LP3 525 aaPredicted RBP6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TEX30Q5JUR7 227 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ZNF684Q5T5D7 378 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 OTPQ5XKR4 325 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 KCTD18Q6PI47 426 aaPredicted RBP6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ARL9Q6T311 187 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 LRRC69Q6ZNQ3 347 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 Q6ZS92 163 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TUBA1AQ71U36 451 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 AAED1Q7RTV5 226 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TMEM123Q8N131 208 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 YIPF7Q8N8F6 280 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 HAVCR2Q8TDQ0 301 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 RNF128Q8TEB7 428 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ABHD3Q8WU67 409 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 C11orf40Q8WZ69 217 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 PELI1Q96FA3 418 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TM9SF2Q99805 663 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 COQ7Q99807 217 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 TMED9Q9BVK6 235 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SEC61A2Q9H9S3 476 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ACOXLQ9NUZ1 547 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 GLTPQ9NZD2 209 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 EMC3Q9P0I2 261 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SPRR3Q9UBC9 169 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ING1Q9UK53 422 aaPredicted RBP6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 CAMK2AQ9UQM7 478 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 GSTK1Q9Y2Q3 226 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SF3B6Q9Y3B4 125 aaKnown RBP6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 GRIP1Q9Y3R0 1128 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 FLVCR1Q9Y5Y0 555 aa6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 SIRT4Q9Y6E7 314 aaPredicted RBP6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 URB1O60287 2271 aaKnown RBP6.78□□□□□ -1.32
SCARNA20.1-201ENST00000516009 ARHGAP21Q5T5U3 1957 aa6.77□□□□□ -1.33
SCARNA20.1-201ENST00000516009 IGKV3D-15A0A087WSY6 115 aa6.77□□□□□ -1.33
SCARNA20.1-201ENST00000516009 TRBV2A0A0J9YWF9 115 aa6.77□□□□□ -1.33
SCARNA20.1-201ENST00000516009 HSPB2A8KAH6 182 aa6.77□□□□□ -1.33
SCARNA20.1-201ENST00000516009 PRR32B1ATL7 298 aa6.77□□□□□ -1.33
SCARNA20.1-201ENST00000516009 K7ENP7 123 aa6.77□□□□□ -1.33
SCARNA20.1-201ENST00000516009 AQP7O14520 342 aa6.77□□□□□ -1.33
SCARNA20.1-201ENST00000516009 RGS9O75916 674 aaPredicted RBP6.77□□□□□ -1.33
SCARNA20.1-201ENST00000516009 AQP8O94778 261 aa6.77□□□□□ -1.33
SCARNA20.1-201ENST00000516009 RPP14O95059 124 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms