RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CCDC197Q8NCU1 140 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 ICA1LQ8NDH6 482 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 CPEB3Q8NE35 698 aaKnown RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 SLC30A7Q8NEW0 376 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 NUP37Q8NFH4 326 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 OR10H5Q8NGA6 315 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 AKR7LQ8NHP1 331 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 ZNF519Q8TB69 540 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 NABP1Q96AH0 204 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 CLPTM1LQ96KA5 538 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 RBP7Q96R05 134 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 TPK1Q9H3S4 243 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 PLK3Q9H4B4 646 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 MYEF2Q9P2K5 600 aaKnown RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 DUSP13Q9UII6 198 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 MAGEL2Q9UJ55 1249 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 ADAM21Q9UKJ8 722 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 CMAHPQ9Y471 501 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 IER3IP1Q9Y5U9 82 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 TEX13CA0A0J9YWL9 993 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 A0A1W2PPL8 197 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 UNC119BA6NIH7 251 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 MGRN1O60291 552 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 GADD45GO95257 159 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 GPANK1O95872 356 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 CLPTM1O96005 669 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 MMP7P09237 267 aaPredicted RBP9.9□□□□□ -0.82
VCAN-212ENST00000515397 BMP4P12644 408 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 ZNF32P17041 273 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 PAX7P23759 505 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 LAP3P28838 519 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 ALDH3B1P43353 468 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 LIMS1P48059 325 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 FXYD6P3P58550 94 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 MS4A2Q01362 244 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 HSF2Q03933 536 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 FXNQ16595 210 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 PABPC1L2AQ5JQF8 200 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 C10orf128Q5T292 105 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 TMEM53Q6P2H8 277 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 IL17RDQ8NFM7 739 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 FAM168AQ92567 244 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 RSRC1Q96IZ7 334 aaKnown RBP9.9□□□□□ -0.82
VCAN-212ENST00000515397 FUZQ9BT04 418 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 DENND2DQ9H6A0 471 aaPredicted RBP9.9□□□□□ -0.82
VCAN-212ENST00000515397 SIAEQ9HAT2 523 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 MOV10Q9HCE1 1003 aaKnown RBP9.9□□□□□ -0.82
VCAN-212ENST00000515397 EMC7Q9NPA0 242 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 CCNB1IP1Q9NPC3 277 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 GRHPRQ9UBQ7 328 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 AURKCQ9UQB9 309 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 SIGLEC7Q9Y286 467 aa9.9□□□□□ -0.82
VCAN-212ENST00000515397 A0A096LNT2 108 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 SLC22A23A1A5C7 686 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 VSTM5A8MXK1 200 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 SOCS2O14508 198 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 MPZL1O95297 269 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 IGHMP01871 453 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 FABP3P05413 133 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 CD14P08571 375 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 RRM2P31350 389 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 ZNF133P52736 654 aaPredicted RBP9.89□□□□□ -0.83
VCAN-212ENST00000515397 MRPS34P82930 218 aaKnown RBP9.89□□□□□ -0.83
VCAN-212ENST00000515397 PSG4Q00888 419 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 GALK2Q01415 458 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 EFNB3Q15768 340 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 SLC36A2Q495M3 483 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 MESTQ5EB52 335 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 THEM4Q5T1C6 240 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 ZNF774Q6NX45 483 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 HDDC2Q7Z4H3 204 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.89□□□□□ -0.83
VCAN-212ENST00000515397 ZDHHC21Q8IVQ6 265 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 C10orf105Q8TEF2 133 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 MCUR1Q96AQ8 359 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 DHRS1Q96LJ7 313 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 TSSK2Q96PF2 358 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 ALG12Q9BV10 488 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 WNT5BQ9H1J7 359 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 ANKRD19PQ9H560 264 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 ZNF442Q9H7R0 627 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 CDH20Q9HBT6 801 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 DYNLRB1Q9NP97 96 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 FAM53CQ9NYF3 392 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 TMEM5Q9Y2B1 443 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 CR1P17927 2039 aa9.89□□□□□ -0.83
VCAN-212ENST00000515397 LOC100509620A0A075B734 347 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 IQCMA0A1B0GVH7 501 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 C5orf49A4QMS7 147 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 HTR3EA5X5Y0 456 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 A6NIZ1 184 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 NPIPB13A6NJU9 1138 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 FAM171A2A8MVW0 826 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 CENPBD1B2RD01 187 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 NPIPB4C9JG80 1138 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 OR10H3O60404 316 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 NDUFB2O95178 105 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 PPP1R3DO95685 299 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 LCKP06239 509 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 NAT2P11245 290 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms