RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 EIF3EP60228 445 aaKnown RBP3.8□□□□□ -1.8
RFC1-216ENST00000514572 MRPS22P82650 360 aaKnown RBP3.8□□□□□ -1.8
RFC1-216ENST00000514572 PAX5Q02548 391 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 ITIH4Q14624 930 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 HADHQ16836 314 aaKnown RBP3.8□□□□□ -1.8
RFC1-216ENST00000514572 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 HSDL1Q3SXM5 330 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 TCTEX1D4Q5JR98 221 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 ATAD3CQ5T2N8 411 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 PIP5KL1Q5T9C9 394 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 FKBP1CQ5VVH2 108 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 CERS6Q6ZMG9 384 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 STXBP4Q6ZWJ1 553 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 SLC26A11Q86WA9 606 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 GABRG1Q8N1C3 465 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 ACOT4Q8N9L9 421 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 NKAPP1Q8N9T2 125 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 FBXL13Q8NEE6 735 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 OR10G3Q8NGC4 313 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 TYMSOSQ8TAI1 123 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 GLYATL2Q8WU03 294 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 FOXN4Q96NZ1 517 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 HIST1H4GQ99525 98 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 TDRD3Q9H7E2 651 aaKnown RBP3.8□□□□□ -1.8
RFC1-216ENST00000514572 FANCEQ9HB96 536 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 GPATCH2LQ9NWQ4 482 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 V9GY05 133 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 MYH13Q9UKX3 1938 aa3.8□□□□□ -1.8
RFC1-216ENST00000514572 RAB29O14966 203 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 TBL1XO60907 577 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 C2P06681 752 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 POLR2MP0CAP2 368 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 ABOP16442 354 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 CXCR2P25025 360 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 STOMP27105 288 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 HSD17B2P37059 387 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 MAGEA1P43355 309 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 CCNHP51946 323 aaPredicted RBP3.79□□□□□ -1.8
RFC1-216ENST00000514572 LIPEQ05469 1076 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 GSG1Q2KHT4 349 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 KLHL40Q2TBA0 621 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 C1orf100Q5SVJ3 147 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 TRIM40Q6P9F5 258 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 GSG1LQ6UXU4 331 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 MOB1BQ7L9L4 216 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 SSX9Q7RTT3 188 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 ZNF525Q8N782 197 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 FAM184AQ8NB25 1140 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 OR1S2Q8NGQ3 325 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 OR2L2Q8NH16 312 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 ZNF564Q8TBZ8 553 aaPredicted RBP3.79□□□□□ -1.8
RFC1-216ENST00000514572 OR1E3Q8WZA6 343 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 SORT1Q99523 831 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 TMEM59Q9BXS4 323 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 DEFB126Q9BYW3 111 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 ANKRD60Q9BZ19 345 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 RNF167Q9H6Y7 350 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 TMEM165Q9HC07 324 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 PACSIN2Q9UNF0 486 aaPredicted RBP3.79□□□□□ -1.8
RFC1-216ENST00000514572 MOKQ9UQ07 419 aa3.79□□□□□ -1.8
RFC1-216ENST00000514572 PTPRFP10586 1907 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 MROH5Q6ZUA9 1318 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 A6NIZ1 184 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 SUPT3HB4E1H0 165 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 GOLGA8TH3BQL2 631 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 LSM1O15116 133 aaKnown RBP3.78□□□□□ -1.8
RFC1-216ENST00000514572 IGKV5-2P06315 115 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 KLK3P07288 261 aaPredicted RBP3.78□□□□□ -1.8
RFC1-216ENST00000514572 P0C879 139 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 CPN2P22792 545 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 RRM2P31350 389 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 NPBWR2P48146 333 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 SLC26A2P50443 739 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 GPM6AP51674 278 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 RAP1BP61224 184 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 SELENBP1Q13228 472 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 AGBL2Q5U5Z8 902 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 C9orf135Q5VTT2 229 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 TIGD3Q6B0B8 471 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 C22orf42Q6IC83 251 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ANGPTL8Q6UXH0 198 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 BAIAP2L2Q6UXY1 529 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 TFAP2EQ6VUC0 442 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ZNF836Q6ZNA1 936 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 FAM220AQ7Z4H9 259 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ZNF546Q86UE3 836 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ZNF321PQ8N8H1 164 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ZNF557Q8N988 423 aaPredicted RBP3.78□□□□□ -1.8
RFC1-216ENST00000514572 OR51S1Q8NGJ8 323 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 OR4A4PQ8NGN8 299 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 MARCH1Q8TCQ1 289 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 PIBF1Q8WXW3 757 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 SMARCD2Q92925 531 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 NEIL2Q969S2 332 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ZNF707Q96C28 371 aaPredicted RBP3.78□□□□□ -1.8
RFC1-216ENST00000514572 C8orf44Q96CB5 159 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ATP5SQ99766 215 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ACTR6Q9GZN1 396 aa3.78□□□□□ -1.8
RFC1-216ENST00000514572 ELOVL6Q9H5J4 265 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms