RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PPP3CBP16298 524 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 CD36P16671 472 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 ZNF43P17038 809 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 PSMB9P28065 219 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 GRPRP30550 384 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 HTR1FP30939 366 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 NTF4P34130 210 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 MTNR1AP48039 350 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 RPS4XP62701 263 aaKnown RBP7.35□□□□□ -1.23
CCL28-204ENST00000514421 TUBA1BP68363 451 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 ACSM1Q08AH1 577 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 C1DQ13901 141 aaKnown RBP7.35□□□□□ -1.23
CCL28-204ENST00000514421 SPCS2Q15005 226 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 P2RY6Q15077 328 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 POU4F3Q15319 338 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 MS4A18Q3C1V0 323 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 ANKDD1AQ495B1 522 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 FBXW9Q5XUX1 488 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 SMARCD3Q6STE5 483 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 TFAP2EQ6VUC0 442 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 STAC2Q6ZMT1 411 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 GDPGP1Q6ZNW5 385 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 Q6ZT83 130 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 CREB3L2Q70SY1 520 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 TUBA1AQ71U36 451 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 AAED1Q7RTV5 226 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 GPAT4Q86UL3 456 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 LSRQ86X29 649 aaPredicted RBP7.35□□□□□ -1.23
CCL28-204ENST00000514421 GID4Q8IVV7 300 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 GABRG1Q8N1C3 465 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 SCAIQ8N9R8 606 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 OR9K2Q8NGE7 335 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 OR52I1Q8NGK6 324 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 PFN4Q8NHR9 129 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 TBC1D15Q8TC07 691 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 FANK1Q8TC84 345 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 DYNC2LI1Q8TCX1 351 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 TMEM45BQ96B21 275 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 APH1AQ96BI3 265 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 LGALS12Q96DT0 336 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 SAMD8Q96LT4 415 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 WFIKKN1Q96NZ8 548 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 OXGR1Q96P68 337 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 GPX7Q96SL4 187 aaPredicted RBP7.35□□□□□ -1.23
CCL28-204ENST00000514421 MGLLQ99685 303 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 USB1Q9BQ65 265 aaKnown RBP7.35□□□□□ -1.23
CCL28-204ENST00000514421 ZNF649Q9BS31 505 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 MND1Q9BWT6 205 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 ASPNQ9BXN1 380 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 OR10A4Q9H209 315 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 SIAEQ9HAT2 523 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 CMC2Q9NRP2 79 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 CRIM1Q9NZV1 1036 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 FLVCR1Q9Y5Y0 555 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 A3GALT2U3KPV4 340 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 ABCA12Q86UK0 2595 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 ITPR2Q14571 2701 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 CREBBPQ92793 2442 aa7.35□□□□□ -1.23
CCL28-204ENST00000514421 CELSR2Q9HCU4 2923 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 OR6C65A6NJZ3 312 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 EFCAB9A8MZ26 197 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 ARPC3O15145 178 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 IDH3BO43837 385 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 CLPXO76031 633 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 OR6A2O95222 327 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 CH25HO95992 272 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 BCL10O95999 233 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 HIST1H2ABP04908 130 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 GAAP10253 952 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 APEHP13798 732 aaKnown RBP7.34□□□□□ -1.23
CCL28-204ENST00000514421 PRF1P14222 555 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 ZNF182P17025 639 aaPredicted RBP7.34□□□□□ -1.23
CCL28-204ENST00000514421 FUT1P19526 365 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 PSMB1P20618 241 aaKnown RBP7.34□□□□□ -1.23
CCL28-204ENST00000514421 TLE4Q04727 773 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 ZP4Q12836 540 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 FOXD4Q12950 439 aaPredicted RBP7.34□□□□□ -1.23
CCL28-204ENST00000514421 MLLT11Q13015 90 aaPredicted RBP7.34□□□□□ -1.23
CCL28-204ENST00000514421 ITGADQ13349 1161 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 DOC2BQ14184 412 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 SPHARQ15513 63 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 ZNF74Q16587 644 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 MOGQ16653 247 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 ARMCX4Q5H9R4 360 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 SFRP5Q5T4F7 317 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 THSD4Q6ZMP0 1018 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 HIST3H2AQ7L7L0 130 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 CXorf67Q86X51 503 aaPredicted RBP7.34□□□□□ -1.23
CCL28-204ENST00000514421 MEX3DQ86XN8 651 aaKnown RBP7.34□□□□□ -1.23
CCL28-204ENST00000514421 UBE2J2Q8N2K1 259 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 KDM8Q8N371 416 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 ADPRHL1Q8NDY3 354 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 STEAP2Q8NFT2 490 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 OR52L1Q8NGH7 329 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 ZNF417Q8TAU3 575 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 HIST1H2ACQ93077 130 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 MOGAT1Q96PD6 335 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 OPALINQ96PE5 141 aa7.34□□□□□ -1.23
CCL28-204ENST00000514421 ZNF385AQ96PM9 386 aaKnown RBP7.34□□□□□ -1.23
CCL28-204ENST00000514421 OR5M11Q96RB7 305 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms