RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 C10orf53Q8N6V4 93 aa8.77□□□□□ -1.01
CLDND1-227ENST00000513452 SLC38A5Q8WUX1 472 aa8.77□□□□□ -1.01
CLDND1-227ENST00000513452 RAB40AQ8WXH6 277 aa8.77□□□□□ -1.01
CLDND1-227ENST00000513452 DACT3Q96B18 629 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-227ENST00000513452 THOC1Q96FV9 657 aaKnown RBP8.77□□□□□ -1.01
CLDND1-227ENST00000513452 FAM71F1Q96KD3 344 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-227ENST00000513452 SIGLEC11Q96RL6 698 aa8.77□□□□□ -1.01
CLDND1-227ENST00000513452 SLC19A3Q9BZV2 496 aa8.77□□□□□ -1.01
CLDND1-227ENST00000513452 C12orf10Q9HB07 376 aa8.77□□□□□ -1.01
CLDND1-227ENST00000513452 MRPL39Q9NYK5 338 aaKnown RBP8.77□□□□□ -1.01
CLDND1-227ENST00000513452 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-227ENST00000513452 CGGBP1Q9UFW8 167 aaPredicted RBP8.77□□□□□ -1.01
CLDND1-227ENST00000513452 C5orf49A4QMS7 147 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 DHHO43323 396 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 TIMM8AO60220 97 aaPredicted RBP8.76□□□□□ -1.01
CLDND1-227ENST00000513452 STOMP27105 288 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 HTR2AP28223 471 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 LIPAP38571 399 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 PCBP3P57721 371 aaKnown RBP8.76□□□□□ -1.01
CLDND1-227ENST00000513452 FGF12P61328 243 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 PPP1CBP62140 327 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 MELKQ14680 651 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 PABPC1L2AQ5JQF8 200 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 C11orf87Q6NUJ2 197 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 PXKQ7Z7A4 578 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 MUC20Q8N307 709 aaPredicted RBP8.76□□□□□ -1.01
CLDND1-227ENST00000513452 HIPK4Q8NE63 616 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 ABHD4Q8TB40 342 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 ZNF566Q969W8 418 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 TMEM19Q96HH6 336 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 EPYCQ99645 322 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 NUDT16L1Q9BRJ7 211 aaKnown RBP8.76□□□□□ -1.01
CLDND1-227ENST00000513452 AKTIPQ9H8T0 292 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 EIF3KQ9UBQ5 218 aaKnown RBP8.76□□□□□ -1.01
CLDND1-227ENST00000513452 PPP1R3CQ9UQK1 317 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 IFT52Q9Y366 437 aa8.76□□□□□ -1.01
CLDND1-227ENST00000513452 ZNF205O95201 554 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 KRT75O95678 551 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 IGHV4-59P01825 116 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 SHBGP04278 402 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 MMP7P09237 267 aaPredicted RBP8.75□□□□□ -1.01
CLDND1-227ENST00000513452 QDPRP09417 244 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 ADORA3P0DMS8 318 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 TNFRSF1AP19438 455 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 TNFSF4P23510 183 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 CRATP43155 626 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 NME5P56597 212 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 BPIFB3P59826 476 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 DSTNP60981 165 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 CDK5R2Q13319 367 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 TTMPQ5BVD1 217 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 MTX3Q5HYI7 312 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 CEP85LQ5SZL2 805 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 UNQ6126/PRO20091Q6UXV3 157 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 Q6ZSV7 163 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 SLC35D2Q76EJ3 337 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 KLBQ86Z14 1044 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 LSMEM1Q8N8F7 131 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 OR2Z1Q8NG97 314 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 OR6S1Q8NH40 331 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 OR6X1Q8NH79 312 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 TBC1D15Q8TC07 691 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 DNAJA4Q8WW22 397 aaPredicted RBP8.75□□□□□ -1.01
CLDND1-227ENST00000513452 ITLN1Q8WWA0 313 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 SLC35B4Q969S0 331 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 PLEKHA8Q96JA3 519 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 TEX37Q96LM6 180 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 SAMD8Q96LT4 415 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 RHOXF2Q9BQY4 288 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 A4GALTQ9NPC4 353 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 AURKAIP1Q9NWT8 199 aaPredicted RBP8.75□□□□□ -1.01
CLDND1-227ENST00000513452 SELENONQ9NZV5 590 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 SLC17A7Q9P2U7 560 aa8.75□□□□□ -1.01
CLDND1-227ENST00000513452 TET2Q6N021 2002 aaPredicted RBP8.75□□□□□ -1.01
CLDND1-227ENST00000513452 LOC100509620A0A075B734 347 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 A0A0G2JPF8 293 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 KIR2DS1A0A191URI9 304 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 TMEM247A6NEH6 219 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 HNRNPCL2B2RXH8 293 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 HNRNPCL3B7ZW38 293 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 TMEM178BH3BS89 294 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 TNFRSF13BO14836 293 aaPredicted RBP8.74□□□□□ -1.01
CLDND1-227ENST00000513452 HNRNPCL1O60812 293 aaKnown RBP8.74□□□□□ -1.01
CLDND1-227ENST00000513452 OR6A2O95222 327 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 SFTPBP07988 381 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 FAM153BP0C7A2 387 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 PGA4P0DJD7 388 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 PGA3P0DJD8 388 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 HNRNPCL4P0DMR1 293 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 GDI2P50395 445 aaKnown RBP8.74□□□□□ -1.01
CLDND1-227ENST00000513452 MMP16P51512 607 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 MVDP53602 400 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 EGR3Q06889 387 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 BST1Q10588 318 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 PDCD4Q53EL6 469 aaKnown RBP8.74□□□□□ -1.01
CLDND1-227ENST00000513452 SLC27A4Q6P1M0 643 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 ULK3Q6PHR2 472 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 COMTD1Q86VU5 262 aa8.74□□□□□ -1.01
CLDND1-227ENST00000513452 C17orf53Q8N3J3 647 aaPredicted RBP8.74□□□□□ -1.01
CLDND1-227ENST00000513452 FITM2Q8N6M3 262 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms