RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ELMOD3Q96FG2 381 aa11.8□□□□□ -0.52
SPCS3-204ENST00000513139 TMEM19Q96HH6 336 aa11.8□□□□□ -0.52
SPCS3-204ENST00000513139 ZNF48Q96MX3 618 aaPredicted RBP11.8□□□□□ -0.52
SPCS3-204ENST00000513139 FOXB1Q99853 325 aa11.8□□□□□ -0.52
SPCS3-204ENST00000513139 SAP30LQ9HAJ7 183 aa11.8□□□□□ -0.52
SPCS3-204ENST00000513139 C12orf10Q9HB07 376 aa11.8□□□□□ -0.52
SPCS3-204ENST00000513139 A4GALTQ9NPC4 353 aa11.8□□□□□ -0.52
SPCS3-204ENST00000513139 ZNF232Q9UNY5 417 aa11.8□□□□□ -0.52
SPCS3-204ENST00000513139 CORO2BQ9UQ03 480 aa11.8□□□□□ -0.52
SPCS3-204ENST00000513139 ZNF443Q9Y2A4 671 aaPredicted RBP11.8□□□□□ -0.52
SPCS3-204ENST00000513139 B2RBV5 119 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 MS4A18H0YCH9 400 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 J3QL48 77 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 TPD52L2O43399 206 aaKnown RBP11.79□□□□□ -0.52
SPCS3-204ENST00000513139 SNAP29O95721 258 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 GRPRP30550 384 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 SLC7A2P52569 658 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 SLC3A1Q07837 685 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 SLC9A3R2Q15599 337 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 CYP51A1Q16850 503 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 MS4A18Q3C1V0 323 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 KLF17Q5JT82 389 aaPredicted RBP11.79□□□□□ -0.52
SPCS3-204ENST00000513139 CARD17Q5XLA6 110 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 LEG1Q6P5S2 330 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 NHLRC1Q6VVB1 395 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 SERPINA11Q86U17 422 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 BCL6BQ8N143 479 aaPredicted RBP11.79□□□□□ -0.52
SPCS3-204ENST00000513139 SLC38A4Q969I6 547 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 TMIGD2Q96BF3 282 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 ZNF583Q96ND8 569 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 TSPAN32Q96QS1 320 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 SH3GL1Q99961 368 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 HOPXQ9BPY8 73 aaPredicted RBP11.79□□□□□ -0.52
SPCS3-204ENST00000513139 ECSITQ9BQ95 431 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 SPATA9Q9BWV2 254 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 ULBP2Q9BZM5 246 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 MMP27Q9H306 513 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 C1orf198Q9H425 327 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 P2RX2Q9UBL9 471 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 TESQ9UGI8 421 aaKnown RBP11.79□□□□□ -0.52
SPCS3-204ENST00000513139 PURGQ9UJV8 347 aaKnown RBP11.79□□□□□ -0.52
SPCS3-204ENST00000513139 CHST2Q9Y4C5 530 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 AUP1Q9Y679 476 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 CACNG2Q9Y698 323 aa11.79□□□□□ -0.52
SPCS3-204ENST00000513139 NME4O00746 187 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 IGHV3-13P01766 116 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 FAM157BP0CG42 384 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 CRISP3P54108 245 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 MXRA7P84157 204 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 CDK6Q00534 326 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 RBBP4Q09028 425 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 ZNF154Q13106 437 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 CALHM3Q86XJ0 350 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 SKA3Q8IX90 412 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 SCAIQ8N9R8 606 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 SLC30A7Q8NEW0 376 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 OR6N1Q8NGY5 312 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 OR6S1Q8NH40 331 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 SLC41A3Q96GZ6 507 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 EMC6Q9BV81 110 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 BCL2L14Q9BZR8 327 aa11.78□□□□□ -0.52
SPCS3-204ENST00000513139 THUMPD1Q9NXG2 353 aaKnown RBP11.78□□□□□ -0.52
SPCS3-204ENST00000513139 TRAV36DV7A0A075B6V5 113 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 TMEM247A6NEH6 219 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 C5orf58C9J3I9 102 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 HPRP00739 348 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 KNG1P01042 644 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 PTHP01270 115 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 IGHMP01871 453 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 LCKP06239 509 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 HLA-DOBP13765 273 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 NQO1P15559 274 aaKnown RBP11.77□□□□□ -0.53
SPCS3-204ENST00000513139 AQP1P29972 269 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 MTNR1AP48039 350 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 MNAT1P51948 309 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 UCP2P55851 309 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 LIPEQ05469 1076 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 SCARB2Q14108 478 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 ZNF362Q5T0B9 420 aaPredicted RBP11.77□□□□□ -0.53
SPCS3-204ENST00000513139 REEP3Q6NUK4 255 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 C16orf87Q6PH81 154 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 C9orf139Q6ZV77 190 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 DPPA2Q7Z7J5 298 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 C11orf65Q8NCR3 313 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 RBM15BQ8NDT2 890 aaKnown RBP11.77□□□□□ -0.53
SPCS3-204ENST00000513139 CPEB3Q8NE35 698 aaKnown RBP11.77□□□□□ -0.53
SPCS3-204ENST00000513139 WFDC12Q8WWY7 111 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 CCL17Q92583 94 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 PKP2Q99959 881 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 RSPO3Q9BXY4 272 aaPredicted RBP11.77□□□□□ -0.53
SPCS3-204ENST00000513139 MS4A7Q9GZW8 240 aaPredicted RBP11.77□□□□□ -0.53
SPCS3-204ENST00000513139 TMEM38AQ9H6F2 299 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 CACYBPQ9HB71 228 aaKnown RBP11.77□□□□□ -0.53
SPCS3-204ENST00000513139 MMP26Q9NRE1 261 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 ADA2Q9NZK5 511 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 PDP1Q9P0J1 537 aaPredicted RBP11.77□□□□□ -0.53
SPCS3-204ENST00000513139 IFT52Q9Y366 437 aa11.77□□□□□ -0.53
SPCS3-204ENST00000513139 A0A087WUJ7 227 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 A0A0G2JPF8 293 aa11.76□□□□□ -0.53
SPCS3-204ENST00000513139 ISPDA4D126 451 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms