RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CYC1P08574 325 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 OR8G3PP0DMU2 310 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 TBXA2RP21731 343 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 GABRA5P31644 462 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 CD200P41217 278 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 RPS26P11Q5JNZ5 115 aaPredicted RBP8.21□□□□□ -1.1
VCAN-208ENST00000512590 ENTHD1Q8IYW4 607 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 CHAC2Q8WUX2 184 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 C8orf44Q96CB5 159 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 TMEM56Q96MV1 263 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 OR5M11Q96RB7 305 aa8.21□□□□□ -1.1
VCAN-208ENST00000512590 TO15178 435 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 XRCC3O43542 346 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 UBL3O95164 117 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 ZNF26P17031 533 aaPredicted RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 FPR3P25089 353 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 KIR3DL2P43630 455 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 ERVFC1P60507 584 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 LAPTM4AQ15012 233 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 CD300LGQ6UXG3 332 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 SMG8Q8ND04 991 aaKnown RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 GLIS3Q8NEA6 775 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 FAM71CQ8NEG0 241 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 RAB2BQ8WUD1 216 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 PACRGQ96M98 296 aaPredicted RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 DIRC2Q96SL1 478 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 VGLL1Q99990 258 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 DPH2Q9BQC3 489 aaPredicted RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 LHPPQ9H008 270 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 NECAP2Q9NVZ3 263 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 CDK2AP2O75956 126 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 FGF3P11487 239 aaPredicted RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 HINT1P49773 126 aaPredicted RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 LSAMPQ13449 338 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 GPR32P1Q8NGA4 272 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 OR13D1Q8NGV5 346 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 SYNPRQ8TBG9 265 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 SEBOXQ9HB31 216 aaPredicted RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 UFC1Q9Y3C8 167 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 BHLHE40O14503 412 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 CXCL13O43927 109 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 PRKYO43930 277 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 HLA-HP01893 362 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 MMP7P09237 267 aaPredicted RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 LIPCP11150 499 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 ARNTP27540 789 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 PPP1R8Q12972 351 aaKnown RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 GAB1Q13480 694 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 SEZ6L2Q6UXD5 910 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 TFAP2EQ6VUC0 442 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 C15orf39Q6ZRI6 1047 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 DND1Q8IYX4 353 aaKnown RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 ZFP41Q8N8Y5 198 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 OR51A2Q8NGJ7 313 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 TERB2Q8NHR7 220 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 KCNA7Q96RP8 456 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 PRSS16Q9NQE7 514 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 C1orf123Q9NWV4 160 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 OR51B4Q9Y5P0 310 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 HCRTO43612 131 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 HNRNPH3P31942 346 aaKnown RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 PNLIPRP2P54317 469 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 BLOC1S1P78537 153 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 SLC9A3R2Q15599 337 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 MDGA2Q7Z553 956 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 RNPEPL1Q9HAU8 725 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 PURGQ9UJV8 347 aaKnown RBP8.2□□□□□ -1.1
VCAN-208ENST00000512590 CCL27Q9Y4X3 112 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 CLTCL1P53675 1640 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 PLIN4Q96Q06 1357 aa8.2□□□□□ -1.1
VCAN-208ENST00000512590 SLC22A5O76082 557 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 EPOP01588 193 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 MGPP08493 103 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 FOLR1P15328 257 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 TNK1Q13470 666 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ETFRF1Q6IPR1 90 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 PRR27Q6MZM9 219 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 PIANPQ8IYJ0 282 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 FGF11Q92914 225 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SLCO4A1Q96BD0 722 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SCRN2Q96FV2 425 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 WDR61Q9GZS3 305 aaKnown RBP8.19□□□□□ -1.1
VCAN-208ENST00000512590 GAR1Q9NY12 217 aaKnown RBP8.19□□□□□ -1.1
VCAN-208ENST00000512590 GPR52Q9Y2T5 361 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 MEGF6O75095 1541 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 OR6C68A6NDL8 312 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 OR2T8A6NH00 312 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 CBR3O75828 277 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 PPP3CBP16298 524 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 LAP3P28838 519 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 OPRM1P35372 400 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 AKR1C3P42330 323 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 PSMB2P49721 201 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 IL13RA1P78552 427 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SEMA3BQ13214 749 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 ECSCRQ19T08 205 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 C22orf42Q6IC83 251 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 SLC35D2Q76EJ3 337 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 TMEM217Q8N7C4 229 aa8.19□□□□□ -1.1
VCAN-208ENST00000512590 OR51H1Q8NH63 302 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms