RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 C2orf72A6NCS6 295 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 LRRC3CA6NJW4 275 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 GJE1A6NN92 205 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 LRRN3E7EW58 273 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 H3BSA7 217 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 ZIC3O60481 467 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 GLSO94925 669 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 INMTO95050 263 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 IL2RAP01589 272 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 GAAP10253 952 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 HIST1H1CP16403 213 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 GRPRP30550 384 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 RPL4P36578 427 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 AQP2P41181 271 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 RPS5P46782 204 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 DNASE1L1P49184 302 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 RAC1P63000 192 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 ACTC1P68032 377 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 ACTA1P68133 377 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 H3F3AP84243 136 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 SORDQ00796 357 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 PUDPQ08623 228 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 MLLT11Q13015 90 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 GPR50Q13585 617 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 C1DQ13901 141 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 CRMP1Q14194 572 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 NHLRC1Q6VVB1 395 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 GDPGP1Q6ZNW5 385 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 LINC00299Q6ZSB3 139 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 HDDC2Q7Z4H3 204 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 ARIH2OSQ8N7S6 290 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 MOSPD2Q8NHP6 518 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 HAVCR2Q8TDQ0 301 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 SMPDL3BQ92485 455 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 ISOC1Q96CN7 298 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 DACH2Q96NX9 599 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 CCDC90BQ9GZT6 254 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 MARCH7Q9H992 704 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 ZFP64Q9NPA5 681 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 VSX1Q9NZR4 365 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 ZNF629Q9UEG4 869 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 IL20RAQ9UHF4 553 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 BOKQ9UMX3 212 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 GPR52Q9Y2T5 361 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 NOX1Q9Y5S8 564 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 IER3IP1Q9Y5U9 82 aa9.28□□□□□ -0.92
PDLIM5-217ENST00000512274 ARPC4-TTLL3A0A0A6YYG9 625 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 A6NIZ1 184 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 BLOC1S5-TXNDC5H3BN57 136 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 M0R082 166 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 GNB5O14775 395 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 EIF1BO60739 113 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 VAMP5O95183 116 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 SLC2A10O95528 541 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 PTHP01270 115 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 SCG5P05408 212 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 HPNP05981 417 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 LIMS3P0CW19 117 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 LIMS4P0CW20 117 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 IMPDH2P12268 514 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 MYL12AP19105 171 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 GALP22466 123 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 TGFBR2P37173 567 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 DIO1P49895 249 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 DAP3P51398 398 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 P2RY4P51582 365 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 WNT4P56705 351 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 B3GALT5-AS1P59052 145 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 CTXN1P60606 82 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 RAP1BP61224 184 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 RPL27P61353 136 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 RAP1AP62834 184 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 SLC35A1P78382 337 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 HSF2Q03933 536 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 PIGFQ07326 219 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 SPHARQ15513 63 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 TIGD6Q17RP2 521 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 CNPY1Q3B7I2 92 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 TIMM50Q3ZCQ8 353 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 OR5M10Q6IEU7 315 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 PLBD1Q6P4A8 553 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 PAQR6Q6TCH4 344 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 TMPPEQ6ZT21 453 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 LUZP2Q86TE4 346 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 ZBTB46Q86UZ6 589 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 ACBD7Q8N6N7 88 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 ZNF417Q8TAU3 575 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 FNDC8Q8TC99 324 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 PIK3IP1Q96FE7 263 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 ARL5BQ96KC2 179 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 ZNF587Q96SQ5 575 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 MGLLQ99685 303 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 RBM24Q9BX46 236 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 GSX2Q9BZM3 304 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 SLC6A15Q9H2J7 730 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 SIAEQ9HAT2 523 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 CHCHD3Q9NX63 227 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 KLHL13Q9P2N7 655 aa9.27□□□□□ -0.93
PDLIM5-217ENST00000512274 GRHPRQ9UBQ7 328 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms