RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ICA1LQ8NDH6 482 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 OR9I1Q8NGQ6 314 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 LINC01006Q8NI28 216 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 SLC38A4Q969I6 547 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 TAAR8Q969N4 342 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 FAM71F1Q96KD3 344 aaPredicted RBP9.73□□□□□ -0.85
RNF4-216ENST00000511859 DCLRE1CQ96SD1 692 aaKnown RBP9.73□□□□□ -0.85
RNF4-216ENST00000511859 SIKE1Q9BRV8 207 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 CHIAQ9BZP6 476 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 RNF121Q9H920 327 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 C12orf10Q9HB07 376 aa9.73□□□□□ -0.85
RNF4-216ENST00000511859 CGGBP1Q9UFW8 167 aaPredicted RBP9.73□□□□□ -0.85
RNF4-216ENST00000511859 TET2Q6N021 2002 aaPredicted RBP9.72□□□□□ -0.85
RNF4-216ENST00000511859 MDFIC2A0A1B0GVS7 189 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 G3V4G9 280 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 SNX3O60493 162 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 FARS2O95363 451 aaKnown RBP9.72□□□□□ -0.85
RNF4-216ENST00000511859 PRG2P13727 222 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 HLA-DOBP13765 273 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 IDO1P14902 403 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 NQO1P15559 274 aaKnown RBP9.72□□□□□ -0.85
RNF4-216ENST00000511859 IL12AP29459 219 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 LOXL3P58215 753 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 PROK1P58294 105 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 STX1BP61266 288 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 SEC61A1P61619 476 aaKnown RBP9.72□□□□□ -0.85
RNF4-216ENST00000511859 GLO1Q04760 184 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 PLP2Q04941 152 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 C6orf89Q6UWU4 347 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 UNQ6126/PRO20091Q6UXV3 157 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 C1orf174Q8IYL3 243 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 MIER2Q8N344 545 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 TRIML2Q8N7C3 387 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 OR10S1Q8NGN2 331 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 OR1J1Q8NGS3 322 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 DYRK2Q92630 601 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 SLC41A3Q96GZ6 507 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 TXNDC15Q96J42 360 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 SLC19A3Q9BZV2 496 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 NANOGQ9H9S0 305 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 TNFRSF19Q9NS68 423 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 SLC6A13Q9NSD5 602 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 TMEM106BQ9NUM4 274 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 CALML5Q9NZT1 146 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 LRCH1Q9Y2L9 728 aa9.72□□□□□ -0.85
RNF4-216ENST00000511859 TRAV36DV7A0A075B6V5 113 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 A0A087WUJ7 227 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 TRAV40A0A0B4J280 105 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 IQCMA0A1B0GVH7 501 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 F5H0A9 414 aaPredicted RBP9.71□□□□□ -0.86
RNF4-216ENST00000511859 HPRP00739 348 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 CD55P08174 381 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 CSF1P09603 554 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 CSNK1A1P48729 337 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 PAX2Q02962 417 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 FAM189A2Q15884 450 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 DPY19L1Q2PZI1 675 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 SLC36A2Q495M3 483 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 PDCD4Q53EL6 469 aaKnown RBP9.71□□□□□ -0.86
RNF4-216ENST00000511859 AGKQ53H12 422 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 ZMAT1Q5H9K5 638 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 SPANXN4Q5MJ08 99 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 CLIP4Q8N3C7 705 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 SCAIQ8N9R8 606 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 BHLHE22Q8NFJ8 381 aaPredicted RBP9.71□□□□□ -0.86
RNF4-216ENST00000511859 OR6S1Q8NH40 331 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 MRAPQ8TCY5 172 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 RAB40AQ8WXH6 277 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 SLC35B4Q969S0 331 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 PPP1R14AQ96A00 147 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 TESCQ96BS2 214 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 ZBTB18Q99592 522 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 MARCH7Q9H992 704 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 A4GALTQ9NPC4 353 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 CCDC167Q9P0B6 97 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 RPS6KB2Q9UBS0 482 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 TRIM33Q9UPN9 1127 aa9.71□□□□□ -0.86
RNF4-216ENST00000511859 ZNF443Q9Y2A4 671 aaPredicted RBP9.71□□□□□ -0.86
RNF4-216ENST00000511859 COL7A1Q02388 2944 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 MGRN1O60291 552 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 SLC22A3O75751 556 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 APLNRP35414 380 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 BTG1P62324 171 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 PUDPQ08623 228 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 MBNL2Q5VZF2 373 aaKnown RBP9.7□□□□□ -0.86
RNF4-216ENST00000511859 PXKQ7Z7A4 578 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 PIGWQ7Z7B1 504 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 SERPINA11Q86U17 422 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 MUC20Q8N307 709 aaPredicted RBP9.7□□□□□ -0.86
RNF4-216ENST00000511859 POU5F2Q8N7G0 328 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 ZNF283Q8N7M2 679 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 TBC1D15Q8TC07 691 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 SSMEM1Q8WWF3 244 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 SAMD8Q96LT4 415 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 SH3GL3Q99963 347 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 SPATA9Q9BWV2 254 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 SSBP3Q9BWW4 388 aaPredicted RBP9.7□□□□□ -0.86
RNF4-216ENST00000511859 ASPNQ9BXN1 380 aa9.7□□□□□ -0.86
RNF4-216ENST00000511859 SDR39U1Q9NRG7 319 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms