RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CUTCQ9NTM9 273 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 SLC35D1Q9NTN3 355 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 IMP3Q9NV31 184 aaKnown RBP2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 NDUFA13Q9P0J0 144 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 CCDC88CQ9P219 2028 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 ERVK-18Q9QC07 812 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 CD84Q9UIB8 345 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 DNPEPQ9ULA0 475 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 ATG4BQ9Y4P1 393 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 CLCA3PQ9Y6N3 262 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 DNAJC13O75165 2243 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 ANKRD12Q6UB98 2062 aa2.72□□□□□ -1.97
TOPBP1-208ENST00000511439 YLPM1P49750 1951 aaKnown RBP2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 DOCK4Q8N1I0 1966 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 IGLV3-12A0A075B6K2 115 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 IGLV3-10A0A075B6K4 115 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 A0A1W2PQ67 120 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 GOLGA6L10A6NI86 522 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 C2orf74A8MZ97 194 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 GOLGA6L19H0YKK7 550 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 K7EIL1 84 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 SH2D1BO14796 132 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ANGPT2O15123 496 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 KDELR3O43731 214 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 REM1O75628 298 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 MT-ATP6P00846 226 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 KRT13P13646 458 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ETS1P14921 441 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 BCL3P20749 454 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 UGT2B10P36537 528 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 CD79BP40259 229 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 MAGEA5P43359 124 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 OR1D4P47884 311 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 GABRA4P48169 554 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 NME3Q13232 169 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 XRCC4Q13426 336 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 RAB35Q15286 201 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 PCK2Q16822 640 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 TMEM44Q2T9K0 475 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ANKRD55Q3KP44 614 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 HIGD2BQ4VC39 106 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 UNC50Q53HI1 259 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ZNF506Q5JVG8 444 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 LEMD1Q68G75 181 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 STEAP1BQ6NZ63 245 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 PMF1Q6P1K2 205 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 PRMT9Q6P2P2 845 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 LEG1Q6P5S2 330 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 REG3GQ6UW15 175 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ZNF550Q7Z398 422 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ELMOD2Q8IZ81 293 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 CYP4Z2PQ8N1L4 340 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 IPMKQ8NFU5 416 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 OR52E1Q8NGJ3 308 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 RDH11Q8TC12 318 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 TMIGD2Q96BF3 282 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 HSFY1Q96LI6 401 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ZFP3Q96NJ6 502 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 TXN2Q99757 166 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 COQ7Q99807 217 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 BLZF1Q9H2G9 400 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 RWDD1Q9H446 243 aaPredicted RBP2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 BEX1Q9HBH7 125 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 FAM60AQ9NP50 221 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ADAP2Q9NPF8 381 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ZNF446Q9NWS9 450 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 CGNQ9P2M7 1197 aaKnown RBP2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 ATXN10Q9UBB4 475 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 SPRR3Q9UBC9 169 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 EIF3KQ9UBQ5 218 aaKnown RBP2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 LHX3Q9UBR4 397 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 COPS7AQ9UBW8 275 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 SLC23A2Q9UGH3 650 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 SLC6A5Q9Y345 797 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 RNF115Q9Y4L5 304 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 WIF1Q9Y5W5 379 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 MED12Q93074 2177 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 SPTBP11277 2137 aa2.71□□□□□ -1.98
TOPBP1-208ENST00000511439 PLCE1Q9P212 2302 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 A0A0A6YYD4 124 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 A0A0U1RRA0 63 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 LRRIQ3A6PVS8 624 aaPredicted RBP2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 M0QYV0 167 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 CLOCKO15516 846 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 BCL2L11O43521 198 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 HCRTR1O43613 425 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 SH3BGRLO75368 114 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 SRSF10O75494 262 aaKnown RBP2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 GLSO94925 669 aaPredicted RBP2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 SYNGR4O95473 234 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 IFNB1P01574 187 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 HLA-DRAP01903 254 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 MELTFP08582 738 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 POU2F1P14859 743 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 CASP4P49662 377 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 CYLC2Q14093 348 aaPredicted RBP2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 HAGHQ16775 308 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 HKDC1Q2TB90 917 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 PGGHGQ32M88 737 aa2.7□□□□□ -1.98
TOPBP1-208ENST00000511439 KRTAP13-3Q3SY46 172 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 300.9 ms