RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 FSHBP01225 129 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 IGHV3-13P01766 116 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 HIST1H2ABP04908 130 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 PRTN3P24158 256 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 PCGF2P35227 344 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 APLNRP35414 380 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 DEFA6Q01524 100 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 GLO1Q04760 184 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 SLC3A1Q07837 685 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 CYLC2Q14093 348 aaPredicted RBP8.84□□□□□ -0.99
DDX41-211ENST00000510171 DUSP7Q16829 419 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 NRN1LQ496H8 165 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 PDLIM3Q53GG5 364 aaPredicted RBP8.84□□□□□ -0.99
DDX41-211ENST00000510171 FAM209AQ5JX71 171 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 LINC00114Q6XXX2 140 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 ZNF771Q7L3S4 317 aaPredicted RBP8.84□□□□□ -0.99
DDX41-211ENST00000510171 HIST3H2AQ7L7L0 130 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 SIGLECL1Q8N7X8 197 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 CPEB3Q8NE35 698 aaKnown RBP8.84□□□□□ -0.99
DDX41-211ENST00000510171 OR1J1Q8NGS3 322 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 ST7LQ8TDW4 575 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 SLC26A7Q8TE54 656 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 GTF3AQ92664 365 aaKnown RBP8.84□□□□□ -0.99
DDX41-211ENST00000510171 HIST1H2ACQ93077 130 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 MCHR1Q99705 422 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 GPA33Q99795 319 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 ARHGDIGQ99819 225 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 WFDC6Q9BQY6 131 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 EGLN1Q9GZT9 426 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 TAS2R5Q9NYW4 299 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 UBAP1Q9NZ09 502 aa8.84□□□□□ -0.99
DDX41-211ENST00000510171 EIF3KQ9UBQ5 218 aaKnown RBP8.84□□□□□ -0.99
DDX41-211ENST00000510171 PPIAL4EA0A075B759 164 aa8.83□□□□□ -1
DDX41-211ENST00000510171 PPIAL4CA0A0B4J2A2 164 aa8.83□□□□□ -1
DDX41-211ENST00000510171 PLSCR5A0PG75 271 aa8.83□□□□□ -1
DDX41-211ENST00000510171 PPIAL4DF5H284 164 aa8.83□□□□□ -1
DDX41-211ENST00000510171 M0R3H8 397 aa8.83□□□□□ -1
DDX41-211ENST00000510171 MGRN1O60291 552 aa8.83□□□□□ -1
DDX41-211ENST00000510171 FOXH1O75593 365 aa8.83□□□□□ -1
DDX41-211ENST00000510171 UBOX5O94941 541 aa8.83□□□□□ -1
DDX41-211ENST00000510171 CH25HO95992 272 aa8.83□□□□□ -1
DDX41-211ENST00000510171 IGHV1-46P01743 117 aa8.83□□□□□ -1
DDX41-211ENST00000510171 IGHG1P01857 330 aa8.83□□□□□ -1
DDX41-211ENST00000510171 PGA4P0DJD7 388 aa8.83□□□□□ -1
DDX41-211ENST00000510171 PGA3P0DJD8 388 aa8.83□□□□□ -1
DDX41-211ENST00000510171 PPIAL4FP0DN26 164 aa8.83□□□□□ -1
DDX41-211ENST00000510171 TROVE2P10155 538 aaKnown RBP eCLIP8.83□□□□□ -1
DDX41-211ENST00000510171 MAKP20794 623 aa8.83□□□□□ -1
DDX41-211ENST00000510171 CCNOP22674 350 aa8.83□□□□□ -1
DDX41-211ENST00000510171 GCH1P30793 250 aa8.83□□□□□ -1
DDX41-211ENST00000510171 ZNF84P51523 738 aa8.83□□□□□ -1
DDX41-211ENST00000510171 CLRN1P58418 232 aa8.83□□□□□ -1
DDX41-211ENST00000510171 HSF2Q03933 536 aa8.83□□□□□ -1
DDX41-211ENST00000510171 SELPLGQ14242 412 aa8.83□□□□□ -1
DDX41-211ENST00000510171 MELKQ14680 651 aa8.83□□□□□ -1
DDX41-211ENST00000510171 ZNF74Q16587 644 aa8.83□□□□□ -1
DDX41-211ENST00000510171 ZNF718Q3SXZ3 478 aa8.83□□□□□ -1
DDX41-211ENST00000510171 COQ5Q5HYK3 327 aa8.83□□□□□ -1
DDX41-211ENST00000510171 ENTPD8Q5MY95 495 aa8.83□□□□□ -1
DDX41-211ENST00000510171 TTC33Q6PID6 262 aaPredicted RBP8.83□□□□□ -1
DDX41-211ENST00000510171 UNQ6126/PRO20091Q6UXV3 157 aa8.83□□□□□ -1
DDX41-211ENST00000510171 DOK3Q7L591 496 aa8.83□□□□□ -1
DDX41-211ENST00000510171 LRRC18Q8N456 261 aa8.83□□□□□ -1
DDX41-211ENST00000510171 OR6T1Q8NGN1 323 aa8.83□□□□□ -1
DDX41-211ENST00000510171 POP5Q969H6 163 aaKnown RBP8.83□□□□□ -1
DDX41-211ENST00000510171 LRRC58Q96CX6 371 aa8.83□□□□□ -1
DDX41-211ENST00000510171 MPP4Q96JB8 637 aa8.83□□□□□ -1
DDX41-211ENST00000510171 TMEM120AQ9BXJ8 343 aa8.83□□□□□ -1
DDX41-211ENST00000510171 SLC19A3Q9BZV2 496 aa8.83□□□□□ -1
DDX41-211ENST00000510171 PCDHAC1Q9H158 963 aa8.83□□□□□ -1
DDX41-211ENST00000510171 KCNN2Q9H2S1 579 aa8.83□□□□□ -1
DDX41-211ENST00000510171 NANSQ9NR45 359 aa8.83□□□□□ -1
DDX41-211ENST00000510171 NUP50Q9UKX7 468 aa8.83□□□□□ -1
DDX41-211ENST00000510171 DYSFO75923 2080 aa8.82□□□□□ -1
DDX41-211ENST00000510171 TRAPPC13A5PLN9 417 aa8.82□□□□□ -1
DDX41-211ENST00000510171 CPSF4LA6NMK7 179 aaKnown RBP8.82□□□□□ -1
DDX41-211ENST00000510171 POM121CA8CG34 1229 aa8.82□□□□□ -1
DDX41-211ENST00000510171 BBIP1A8MTZ0 92 aa8.82□□□□□ -1
DDX41-211ENST00000510171 OPN1SWP03999 348 aa8.82□□□□□ -1
DDX41-211ENST00000510171 MMP7P09237 267 aaPredicted RBP8.82□□□□□ -1
DDX41-211ENST00000510171 SBK2P0C263 348 aa8.82□□□□□ -1
DDX41-211ENST00000510171 CD247P20963 164 aa8.82□□□□□ -1
DDX41-211ENST00000510171 ZFP36P26651 326 aaKnown RBP8.82□□□□□ -1
DDX41-211ENST00000510171 STOMP27105 288 aa8.82□□□□□ -1
DDX41-211ENST00000510171 LIPAP38571 399 aa8.82□□□□□ -1
DDX41-211ENST00000510171 MMP15P51511 669 aa8.82□□□□□ -1
DDX41-211ENST00000510171 BAMBIQ13145 260 aa8.82□□□□□ -1
DDX41-211ENST00000510171 MAPRE2Q15555 327 aa8.82□□□□□ -1
DDX41-211ENST00000510171 NPTX1Q15818 432 aa8.82□□□□□ -1
DDX41-211ENST00000510171 HIST3H3Q16695 136 aa8.82□□□□□ -1
DDX41-211ENST00000510171 VMACQ2NL98 169 aa8.82□□□□□ -1
DDX41-211ENST00000510171 ARMCX4Q5H9R4 360 aa8.82□□□□□ -1
DDX41-211ENST00000510171 THEM4Q5T1C6 240 aa8.82□□□□□ -1
DDX41-211ENST00000510171 NANOGP8Q6NSW7 305 aa8.82□□□□□ -1
DDX41-211ENST00000510171 TREML4Q6UXN2 200 aa8.82□□□□□ -1
DDX41-211ENST00000510171 CCDC80Q76M96 950 aa8.82□□□□□ -1
DDX41-211ENST00000510171 LRRC17Q8N6Y2 441 aa8.82□□□□□ -1
DDX41-211ENST00000510171 GPR32P1Q8NGA4 272 aa8.82□□□□□ -1
DDX41-211ENST00000510171 OR8J3Q8NGG0 315 aa8.82□□□□□ -1
DDX41-211ENST00000510171 OR10A6Q8NH74 314 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms