RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RBMS2Q15434 407 aaKnown RBP16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 OTPQ5XKR4 325 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 ZNF626Q68DY1 528 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 D2HGDHQ8N465 521 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 STK35Q8TDR2 534 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 GPR119Q8TDV5 335 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 C17orf50Q8WW18 174 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 VN1R1Q9GZP7 353 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 ZNF576Q9H609 170 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 MRPL22Q9NWU5 206 aaKnown RBP16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 CKLFQ9UBR5 152 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 UBQLN2Q9UHD9 624 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 SLC22A13Q9Y226 551 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 A0A1B0GX78 115 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 SLC22A23A1A5C7 686 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 FADS1O60427 444 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 FOLR1P15328 257 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 CRABP1P29762 137 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 CAMK2BQ13554 666 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 EIF2B1Q14232 305 aaKnown RBP16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 COL19A1Q14993 1142 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 C5orf46Q6UWT4 87 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 ZNF248Q8NDW4 579 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 FAM3DQ96BQ1 224 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 PCED1AQ9H1Q7 454 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 MTCH2Q9Y6C9 303 aa16.16■□□□□ 0.18
CCHCR1-228ENST00000509552 LOC100289279A0A1B0GTE1 492 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 TTLL8A6PVC2 850 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 G3V3Q6 166 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 M0R233 179 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 SLC17A2O00624 439 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 PLPP3O14495 311 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 SNAPC5O75971 98 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 WISP1O95388 367 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 IGHMP01871 453 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 CD2P06729 351 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 ITGA5P08648 1049 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 CTLA4P16410 223 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 GLO1Q04760 184 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 EXOSC2Q13868 293 aaKnown RBP16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 C2orf76Q3KRA6 126 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 ZNF441Q8N8Z8 693 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 DUSP19Q8WTR2 217 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 SLC17A5Q9NRA2 495 aa16.15■□□□□ 0.18
CCHCR1-228ENST00000509552 COL5A1P20908 1838 aaPredicted RBP16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 TRAV18A0A075B6X5 111 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 UBE2QL1A1L167 161 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 NUDT21O43809 227 aaKnown RBP16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 RAD1O60671 282 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 PIAS2O75928 621 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 FBXO45P0C2W1 286 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 EFNB2P52799 333 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 RAP2BP61225 183 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 PUDPQ08623 228 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 OR7E24Q6IFN5 339 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 NDUFAF7Q7L592 441 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 CCDC28AQ8IWP9 274 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 ELMOD2Q8IZ81 293 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 ZNF454Q8N9F8 522 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 OR4C16Q8NGL9 310 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 C8orf44Q96CB5 159 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 ZNF587Q96SQ5 575 aaPredicted RBP16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 GINS4Q9BRT9 223 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 CHRDQ9H2X0 955 aa16.14■□□□□ 0.18
CCHCR1-228ENST00000509552 SEC16AO15027 2179 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 MPC2O95563 127 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 PNPP00491 289 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 PRSS3P35030 304 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 RAB14P61106 215 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 ETFDHQ16134 617 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 GLT8D1Q68CQ7 371 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 TMEM234Q8WY98 164 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 ABHD6Q9BV23 337 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 OR11A1Q9GZK7 315 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 CA10Q9NS85 328 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 CA14Q9ULX7 337 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 MAB21L2Q9Y586 359 aa16.14■□□□□ 0.17
CCHCR1-228ENST00000509552 PYCARD-AS1I3L0S3 204 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 AKAIN1P0CW23 69 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 CFHR1Q03591 330 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 MELKQ14680 651 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 MISPQ8IVT2 679 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 UXS1Q8NBZ7 420 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 SEMA4CQ9C0C4 833 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 A0A0C4DFX4 3053 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 ALPK2Q86TB3 2170 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 SOX1O00570 391 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 GTF2F2P13984 249 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 SLC26A5P58743 744 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 TDGQ13569 410 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 GRK1Q15835 563 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 CLLU1Q5K131 121 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 YOD1Q5VVQ6 348 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 TMEM225Q6GV28 225 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 LANCL3Q6ZV70 420 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 OR52N5Q8NH56 324 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 SLC41A2Q96JW4 573 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 ATG5Q9H1Y0 275 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 PIPOXQ9P0Z9 390 aa16.13■□□□□ 0.17
CCHCR1-228ENST00000509552 PPIEQ9UNP9 301 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms