RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CLEC6AQ6EIG7 209 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 TFAP2EQ6VUC0 442 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 CPEB2Q7Z5Q1 589 aaKnown RBP3.54□□□□□ -1.84
NEDD4-209ENST00000508871 RDH10Q8IZV5 341 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 DTX3Q8N9I9 347 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 RNASEH2CQ8TDP1 164 aaKnown RBP3.54□□□□□ -1.84
NEDD4-209ENST00000508871 PNPLA2Q96AD5 504 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 SLC38A3Q99624 504 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 TRMOQ9BU70 441 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 RBM24Q9BX46 236 aaKnown RBP3.54□□□□□ -1.84
NEDD4-209ENST00000508871 SEBOXQ9HB31 216 aaPredicted RBP3.54□□□□□ -1.84
NEDD4-209ENST00000508871 SPANXA1Q9NS26 97 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 IL37Q9NZH6 218 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 KIF25Q9UIL4 384 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 TMPRSS11EQ9UL52 423 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 MRPS28Q9Y2Q9 187 aaKnown RBP3.54□□□□□ -1.84
NEDD4-209ENST00000508871 B4DGG1 531 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 H0YGN5 161 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 PCDH7O60245 1069 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 SUPT7LO94864 414 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 TBX6O95947 436 aaPredicted RBP3.54□□□□□ -1.84
NEDD4-209ENST00000508871 RBMY1CP0DJD4 496 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 M6PRP20645 277 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 SDC4P31431 198 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 TNFSF8P32971 234 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 RPL5P46777 297 aaKnown RBP3.54□□□□□ -1.84
NEDD4-209ENST00000508871 TEKQ02763 1124 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 DSC1Q08554 894 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 VMACQ2NL98 169 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 SYTL3Q4VX76 610 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 ACTBL2Q562R1 376 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 GATSQ8NAP1 163 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 RNF128Q8TEB7 428 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 OR2M2Q96R28 347 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 CPXM1Q96SM3 734 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 FAM234AQ9H0X4 552 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 TXNIPQ9H3M7 391 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.54□□□□□ -1.84
NEDD4-209ENST00000508871 PARPBPQ9NWS1 579 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 PAK5Q9P286 719 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 B4GALT7Q9UBV7 327 aa3.54□□□□□ -1.84
NEDD4-209ENST00000508871 FOXA2Q9Y261 457 aaPredicted RBP3.54□□□□□ -1.84
NEDD4-209ENST00000508871 A0A1W2PNV4 684 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 FUOMA2VDF0 154 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 HHLA1C9JL84 531 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 PDLIM1O00151 329 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ITGB1BP1O14713 200 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 KMOO15229 486 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SLC31A1O15431 190 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 RS1O15537 224 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 NUDT14O95848 222 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 HAPLN1P10915 354 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CHRNB1P11230 501 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MPZP25189 248 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ERP29P30040 261 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ISL1P61371 349 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 POLR2LP62875 67 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 DPYSL3Q14195 570 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 POU6F1Q14863 301 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 PAFAH1B3Q15102 231 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 AWAT1Q58HT5 328 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 OTUD1Q5VV17 481 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 TMPRSS11AQ6ZMR5 421 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 APCDD1Q8J025 514 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 WDSUB1Q8N9V3 476 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MARCH1Q8TCQ1 289 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CD99L2Q8TCZ2 262 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 LCORQ96JN0 433 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CD320Q9NPF0 282 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CALML5Q9NZT1 146 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CNOT11Q9UKZ1 510 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 GINS2Q9Y248 185 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 YIPF1Q9Y548 306 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 HCFC2Q9Y5Z7 792 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 PUS1Q9Y606 427 aaKnown RBP eCLIP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ANKRD36A6QL64 1941 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 A0A0G2JMP0 313 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SERINC4A6NH21 518 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CASTOR2A6NHX0 329 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 METTL15A6NJ78 407 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SURF4O15260 269 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MAGEB4O15481 346 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 NARSO43776 548 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 BGNP21810 368 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CPN2P22792 545 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 DRD3P35462 400 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 TPRG1Q6ZUI0 275 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CARM1Q86X55 608 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 PTOV1Q86YD1 416 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SIAH3Q8IW03 269 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 KLHDC8BQ8IXV7 354 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF738Q8NE65 137 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 C17orf47Q8NEP4 570 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 OR4F17Q8NGA8 305 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 OR4M2Q8NGB6 313 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 OR1N2Q8NGR9 330 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 OR4F5Q8NH21 305 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 EMG1Q92979 244 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MARC2Q969Z3 335 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SEC22AQ96IW7 307 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms