RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SSBP1Q04837 148 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 EGR3Q06889 387 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 BAMBIQ13145 260 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 EXOSC2Q13868 293 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 TOMM34Q15785 309 aaPredicted RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ELOA3BQ3SY89 546 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 LINC01590Q5TEZ4 76 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 STAC2Q6ZMT1 411 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ATG4DQ86TL0 474 aaPredicted RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 FTMTQ8N4E7 242 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF433Q8N7K0 673 aaPredicted RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 BEST4Q8NFU0 473 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ELOA3Q8NG57 546 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 OR51L1Q8NGJ5 315 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 LRRC20Q8TCA0 184 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 PMEPA1Q969W9 287 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 C8orf44Q96CB5 159 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 SLC25A38Q96DW6 304 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 SPSB2Q99619 263 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 AUNIPQ9H7T9 357 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 EXOSC3Q9NQT5 275 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 ADAM18Q9Y3Q7 739 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 MPDZO75970 2070 aa9.95□□□□□ -0.82
SH3RF1-203ENST00000508685 EP300Q09472 2414 aaPredicted RBP9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ZSCAN5BA6NJL1 495 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 TO15178 435 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF354AO60765 605 aaPredicted RBP9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ALOX12BO75342 701 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 OR2A4O95047 310 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 NDUFB6O95139 128 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 RRASP10301 218 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF28P17035 718 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 CFPP27918 469 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 SDHAP31040 664 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 CENPAP49450 140 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 P2RX1P51575 399 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ZP1P60852 638 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ERVK-25P63136 954 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 LEG1Q6P5S2 330 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ESPNLQ6ZVH7 1005 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 DND1Q8IYX4 353 aaKnown RBP9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 SUMF1Q8NBK3 374 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 C7orf57Q8NEG2 295 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 OR2T4Q8NH00 348 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 MOSPD2Q8NHP6 518 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF563Q8TA94 476 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 DNAJA3Q96EY1 480 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 OR2A7Q96R45 310 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 GFI1Q99684 422 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 COMMD4Q9H0A8 199 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 OR10A4Q9H209 315 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 NKIRAS2Q9NYR9 191 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 OR5V1Q9UGF6 321 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 PTPRZ1P23471 2315 aaPredicted RBP9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 RPS10-NUDT3A0A1W2PQS6 291 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 UBE2QL1A1L167 161 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 OR6C76A6NM76 312 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 TMEM212A6NML5 194 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 MEN1O00255 615 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 NTN3O00634 580 aaPredicted RBP9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 MAGEB4O15481 346 aaPredicted RBP9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 GMDSO60547 372 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 RBBP9O75884 186 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 RGS11O94810 467 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 CCL4P13236 92 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 VEGFCP49767 419 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 TSPAN5P62079 268 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 EGR4Q05215 589 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 RASGEF1BQ0VAM2 473 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 OPCMLQ14982 345 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF626Q68DY1 528 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 POMZP3Q6PJE2 187 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ASCL5Q7RTU5 278 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 COMMD7Q86VX2 200 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ZNF227Q86WZ6 799 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ADGRG3Q86Y34 549 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 EXD3Q8N9H8 876 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 NFAM1Q8NET5 270 aaPredicted RBP9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 MAP6Q96JE9 813 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 KLHL15Q96M94 604 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 MOGAT1Q96PD6 335 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 RBP7Q96R05 134 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 WDR77Q9BQA1 342 aaPredicted RBP9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 TTTY10Q9BZA0 68 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 TBL1XR1Q9BZK7 514 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 SLC17A5Q9NRA2 495 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 MED9Q9NWA0 146 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 ANKRD10Q9NXR5 420 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 MGAT4CQ9UBM8 478 aa9.94□□□□□ -0.82
SH3RF1-203ENST00000508685 OR6C65A6NJZ3 312 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 ACOD1A6NK06 481 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 VSTM2BA6NLU5 285 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 HMSDA8MTL9 139 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 ALG1L2C9J202 215 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 ARPC1BO15143 372 aaKnown RBP9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 XRCC3O43542 346 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 GFRA3O60609 400 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 UPK3AO75631 287 aa9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 GLSO94925 669 aaPredicted RBP9.93□□□□□ -0.82
SH3RF1-203ENST00000508685 MPC2O95563 127 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms