RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 MYBPC1Q00872 1141 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 SLC36A3Q495N2 470 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 FAM27BQ5VT28 67 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 ADAM5Q6NVV9 412 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 LEG1Q6P5S2 330 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 SLC22A25Q6T423 547 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 UNQ6126/PRO20091Q6UXV3 157 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 ZNF704Q6ZNC4 412 aaPredicted RBP7.98□□□□□ -1.13
NUP54-207ENST00000508583 SYT9Q86SS6 491 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 ALDH16A1Q8IZ83 802 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 OR4F15Q8NGB8 312 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 OR1J2Q8NGS2 313 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 OR2T4Q8NH00 348 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 PYDC1Q8WXC3 89 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 FBXW5Q969U6 566 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 RASD2Q96D21 266 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 ZNF837Q96EG3 531 aaPredicted RBP7.98□□□□□ -1.13
NUP54-207ENST00000508583 PLEKHA8Q96JA3 519 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 LURAP1Q96LR2 239 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 NIPSNAP1Q9BPW8 284 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 RBM4BQ9BQ04 359 aaKnown RBP7.98□□□□□ -1.13
NUP54-207ENST00000508583 TMEM204Q9BSN7 226 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 RBM4Q9BWF3 364 aaKnown RBP7.98□□□□□ -1.13
NUP54-207ENST00000508583 RACGAP1Q9H0H5 632 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 GABARAPL1Q9H0R8 117 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 EGLN3Q9H6Z9 239 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 RNF121Q9H920 327 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 SEC61A2Q9H9S3 476 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 NTN4Q9HB63 628 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 KRT84Q9NSB2 600 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 FBXO9Q9UK97 447 aaPredicted RBP7.98□□□□□ -1.13
NUP54-207ENST00000508583 SPEF1Q9Y4P9 236 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 TACC2O95359 2948 aa7.98□□□□□ -1.13
NUP54-207ENST00000508583 NOTCH2Q04721 2471 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 HEATR1Q9H583 2144 aaKnown RBP7.97□□□□□ -1.13
NUP54-207ENST00000508583 IQCMA0A1B0GVH7 501 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 A0A1W2PR80 420 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 DPRXA6NFQ7 191 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 HS3ST1O14792 307 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 SLC16A7O60669 478 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 SEC14L2O76054 403 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 SOX14O95416 240 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 HLA-HP01893 362 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 RAF1P04049 648 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 CST2P09228 141 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 BMP4P12644 408 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 DNASE1P24855 282 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 POU1F1P28069 291 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 LAP3P28838 519 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 GRK5P34947 590 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 CDH11P55287 796 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 LSM6P62312 80 aaKnown RBP7.97□□□□□ -1.13
NUP54-207ENST00000508583 RAB1AP62820 205 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 GALK2Q01415 458 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 HSF2Q03933 536 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 FMODQ06828 376 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.97□□□□□ -1.13
NUP54-207ENST00000508583 SCRN3Q0VDG4 424 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 NPRL3Q12980 569 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 KEAP1Q14145 624 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 SGCAQ16586 387 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 PGGHGQ32M88 737 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 ZNF672Q499Z4 452 aaPredicted RBP7.97□□□□□ -1.13
NUP54-207ENST00000508583 FAHD1Q6P587 224 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 PAMR1Q6UXH9 720 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 FOXL2NBQ6ZUU3 175 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 C22orf34Q6ZV56 151 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 TMEM179BQ7Z7N9 219 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 AMIGO2Q86SJ2 522 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 CDH24Q86UP0 819 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 MDP1Q86V88 176 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 OR10H5Q8NGA6 315 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 OR52E2Q8NGJ4 325 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 OR4K13Q8NH42 304 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 LRTOMTQ8WZ04 291 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 PIGTQ969N2 578 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 RERGLQ9H628 205 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 UBTD1Q9HAC8 227 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 CMC2Q9NRP2 79 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 NPAP1Q9NZP6 1156 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 KCNG2Q9UJ96 466 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 OAZ3Q9UMX2 235 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 POLR1DQ9Y2S0 133 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 FKBP7Q9Y680 259 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 APCP25054 2843 aa7.97□□□□□ -1.13
NUP54-207ENST00000508583 LRBAP50851 2863 aa7.96□□□□□ -1.13
NUP54-207ENST00000508583 PRR14LQ5THK1 2151 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 IGHV1-18A0A0C4DH31 117 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 H7C1C5 153 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 SIAH2O43255 324 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 HLA-DQA2P01906 255 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 SERPINA5P05154 406 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 CECR9P0C854 216 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 CTLA4P16410 223 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 IGFBP5P24593 272 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 APLNRP35414 380 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 CDKN2AP42771 156 aaKnown RBP7.96□□□□□ -1.14
NUP54-207ENST00000508583 GIPRP48546 466 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 IDH3GP51553 393 aaPredicted RBP7.96□□□□□ -1.14
NUP54-207ENST00000508583 SLC25A1P53007 311 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms