RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 NGFP01138 241 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 SCG5P05408 212 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 AQP2P41181 271 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 LCN2P80188 198 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 THEM4Q5T1C6 240 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 C10orf128Q5T292 105 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 SLC16A14Q7RTX9 510 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 OR1J1Q8NGS3 322 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 SLC25A40Q8TBP6 338 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 TRIM44Q96DX7 344 aaPredicted RBP11.31□□□□□ -0.6
DDX41-206ENST00000506965 ZNF607Q96SK3 696 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 RBM4Q9BWF3 364 aaKnown RBP11.31□□□□□ -0.6
DDX41-206ENST00000506965 WNT5BQ9H1J7 359 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 RNF121Q9H920 327 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 KLHL21Q9UJP4 597 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 ZNF229Q9UJW7 825 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 FBXL3Q9UKT7 428 aa11.31□□□□□ -0.6
DDX41-206ENST00000506965 A0A0G2JMP0 313 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 A0A0X1KG70 313 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 TRAPPC13A5PLN9 417 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 POLR3GO15318 223 aaPredicted RBP11.3□□□□□ -0.6
DDX41-206ENST00000506965 PIP5K1CO60331 668 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 PRSS23O95084 383 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 PPIBP23284 216 aaKnown RBP11.3□□□□□ -0.6
DDX41-206ENST00000506965 PSG4Q00888 419 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 FHL1Q13642 323 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 TBC1D28Q2M2D7 210 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 PCGF3Q3KNV8 242 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 PRR31Q5SQ13 230 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 DCAF12L2Q5VW00 463 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 TMEM53Q6P2H8 277 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 TMEM154Q6P9G4 183 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 SLC25A47Q6Q0C1 308 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 SIGLECL1Q8N7X8 197 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 RBM15BQ8NDT2 890 aaKnown RBP11.3□□□□□ -0.6
DDX41-206ENST00000506965 OR4M2Q8NGB6 313 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 SGMS2Q8NHU3 365 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 TMEM255BQ8WV15 326 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 C11orf40Q8WZ69 217 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 CCDC28BQ9BUN5 200 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 OR2J1Q9GZK6 312 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 KAT8Q9H7Z6 458 aaKnown RBP11.3□□□□□ -0.6
DDX41-206ENST00000506965 SAP30LQ9HAJ7 183 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 SELENONQ9NZV5 590 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 ANGPT4Q9Y264 503 aa11.3□□□□□ -0.6
DDX41-206ENST00000506965 CLDN25C9JDP6 229 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 BLOC1S5-TXNDC5H3BN57 136 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 SERPINB7O75635 380 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 OR6A2O95222 327 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 BCL10O95999 233 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 IGHV2-70P01814 119 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 IGHG1P01857 330 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 ACADSP16219 412 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 ERFP50548 548 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 ATP4BP51164 291 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 ZNF81P51508 661 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 CLRN1P58418 232 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 STX1BP61266 288 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 ERVK-25P63136 954 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 MRPS34P82930 218 aaKnown RBP11.29□□□□□ -0.6
DDX41-206ENST00000506965 SLC36A2Q495M3 483 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 NRN1LQ496H8 165 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 TTC33Q6PID6 262 aaPredicted RBP11.29□□□□□ -0.6
DDX41-206ENST00000506965 Q6ZR03 302 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 NANOGNBQ7Z5D8 188 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 DHDDSQ86SQ9 333 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 SNX32Q86XE0 403 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 DPP10Q8N608 796 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 C11orf65Q8NCR3 313 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 KLF14Q8TD94 323 aaPredicted RBP11.29□□□□□ -0.6
DDX41-206ENST00000506965 CCL17Q92583 94 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 RAB39BQ96DA2 213 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 THOC1Q96FV9 657 aaKnown RBP11.29□□□□□ -0.6
DDX41-206ENST00000506965 SIGLEC11Q96RL6 698 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 CGREF1Q99674 301 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 BCL2L14Q9BZR8 327 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 C7orf69Q9H7B7 122 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 MSL2Q9HCI7 577 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 SLCO1C1Q9NYB5 712 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 ZNF69Q9UC07 566 aa11.29□□□□□ -0.6
DDX41-206ENST00000506965 NOTCH1P46531 2555 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 SLC22A23A1A5C7 686 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 J3QLI3 93 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 FBP2O00757 339 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 OR7A10O76100 309 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 TGDSO95455 350 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 ADH4P08319 380 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 HKR1P10072 659 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 CCNOP22674 350 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 STOMP27105 288 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 LSP1P33241 339 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 PCGF2P35227 344 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 RAD52P43351 418 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 ENDOGQ14249 297 aaKnown RBP11.28□□□□□ -0.6
DDX41-206ENST00000506965 LAPTM4AQ15012 233 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 MBNL2Q5VZF2 373 aaKnown RBP11.28□□□□□ -0.6
DDX41-206ENST00000506965 OTPQ5XKR4 325 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 LRRC75AQ8NAA5 344 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 SNX33Q8WV41 574 aa11.28□□□□□ -0.6
DDX41-206ENST00000506965 ZMYND19Q96E35 227 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms