RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 LRRC34Q8IZ02 419 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 C10orf111Q8N326 155 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 KLHL36Q8N4N3 616 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 ZNF283Q8N7M2 679 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 OR6S1Q8NH40 331 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 TBC1D15Q8TC07 691 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 MRAPQ8TCY5 172 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 MGARPQ8TDB4 240 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 SSMEM1Q8WWF3 244 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 MAL2Q969L2 176 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 TAAR8Q969N4 342 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 SLC35B4Q969S0 331 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 TMEM19Q96HH6 336 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 OR2M2Q96R28 347 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 ROPN1BQ9BZX4 212 aaPredicted RBP5.04□□□□□ -1.6
GYPB-204ENST00000504951 EGLN1Q9GZT9 426 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 ROPN1Q9HAT0 212 aaPredicted RBP5.04□□□□□ -1.6
GYPB-204ENST00000504951 C12orf10Q9HB07 376 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.04□□□□□ -1.6
GYPB-204ENST00000504951 ZDHHC8Q9ULC8 765 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.04□□□□□ -1.6
GYPB-204ENST00000504951 LRCH1Q9Y2L9 728 aa5.04□□□□□ -1.6
GYPB-204ENST00000504951 A0A1W2PPW3 197 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 LRRN3E7EW58 273 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 MS4A18H0YCH9 400 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 IFNL4K9M1U5 179 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 M0R3G1 203 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 RFXANKO14593 260 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 XPNPEP2O43895 674 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 TPST1O60507 370 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 AHSA1O95433 338 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 RAB36O95755 333 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 CLPTM1O96005 669 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 WNT2P09544 360 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 PATE4P0C8F1 98 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 IGHV4-38-2P0DP08 117 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 NCF2P19878 526 aaPredicted RBP5.03□□□□□ -1.6
GYPB-204ENST00000504951 TUBG1P23258 451 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 GRPRP30550 384 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 CRATP43155 626 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 GIPRP48546 466 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 MMP15P51511 669 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 DSTNP60981 165 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 COPZ1P61923 177 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 STX3Q13277 289 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 MFSD13AQ14CX5 517 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 FAM189A2Q15884 450 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 DEFB112Q30KQ8 113 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 MS4A18Q3C1V0 323 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 LIN52Q52LA3 116 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 MBNL2Q5VZF2 373 aaKnown RBP5.03□□□□□ -1.6
GYPB-204ENST00000504951 CARD17Q5XLA6 110 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 C11orf88Q6PI97 169 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 C6orf89Q6UWU4 347 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 MAVSQ7Z434 540 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 LDLRAD3Q86YD5 345 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 TRIML2Q8N7C3 387 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 POU5F2Q8N7G0 328 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 BHLHE22Q8NFJ8 381 aaPredicted RBP5.03□□□□□ -1.6
GYPB-204ENST00000504951 OR9I1Q8NGQ6 314 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 OR1J2Q8NGS2 313 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 FGFBP3Q8TAT2 258 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 FAM110DQ8TAY7 271 aaPredicted RBP5.03□□□□□ -1.6
GYPB-204ENST00000504951 RAB40AQ8WXH6 277 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.03□□□□□ -1.6
GYPB-204ENST00000504951 CCL17Q92583 94 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 THOC1Q96FV9 657 aaKnown RBP5.03□□□□□ -1.6
GYPB-204ENST00000504951 TXNDC15Q96J42 360 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 SAMD8Q96LT4 415 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 WFDC6Q9BQY6 131 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 EMC6Q9BV81 110 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 TMEM109Q9BVC6 243 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 SPATA9Q9BWV2 254 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 CHIAQ9BZP6 476 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 TPT1P8Q9HAU6 139 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 B3GAT2Q9NPZ5 323 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 TUBG2Q9NRH3 451 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 P2RX2Q9UBL9 471 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 EGFL7Q9UHF1 273 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 FZR1Q9UM11 496 aa5.03□□□□□ -1.6
GYPB-204ENST00000504951 COL7A1Q02388 2944 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 IGHV2-70DA0A0C4DH43 119 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 A0A0G2JPF8 293 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 LOC100653049A0A140TA62 436 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 A0A1B0GWA3 101 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 HNRNPCL2B2RXH8 293 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 HNRNPCL3B7ZW38 293 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 AIM2O14862 343 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 ZNF500O60304 480 aaPredicted RBP5.02□□□□□ -1.61
GYPB-204ENST00000504951 TPST2O60704 377 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 HNRNPCL1O60812 293 aaKnown RBP5.02□□□□□ -1.61
GYPB-204ENST00000504951 KRT34O76011 436 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 KRT75O95678 551 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 IGHV1-46P01743 117 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 MELTFP08582 738 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 HNRNPCL4P0DMR1 293 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 CD79AP11912 226 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 B4GALT1P15291 398 aa5.02□□□□□ -1.61
GYPB-204ENST00000504951 JUNBP17275 347 aaPredicted RBP5.02□□□□□ -1.61
GYPB-204ENST00000504951 HOXB9P17482 250 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms