RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 LINC00032P0C843 101 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 NEFHP12036 1026 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 NQO1P15559 274 aaKnown RBP10.31□□□□□ -0.76
LSM6-204ENST00000504181 NCF2P19878 526 aaPredicted RBP10.31□□□□□ -0.76
LSM6-204ENST00000504181 KIR2DS4P43632 304 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 CSNK1A1P48729 337 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 SYPL1Q16563 259 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 MS4A18Q3C1V0 323 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 SLC36A2Q495M3 483 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 METTL11BQ5VVY1 283 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 WDR88Q6ZMY6 472 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 ZCCHC23Q6ZST2 131 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 RFPL4BQ6ZWI9 263 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 H1FNTQ75WM6 255 aaPredicted RBP10.31□□□□□ -0.76
LSM6-204ENST00000504181 SLC16A14Q7RTX9 510 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 PTOV1Q86YD1 416 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 ZNF440Q8IYI8 595 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 KRTCAP2Q8N6L1 136 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 SPERTQ8NA61 448 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 OR4K5Q8NGD3 323 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 OR4C13Q8NGP0 309 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 C10orf82Q8WW14 230 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 TAAR8Q969N4 342 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 COQ8BQ96D53 544 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 OR2V2Q96R30 315 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 CITED2Q99967 270 aaPredicted RBP10.31□□□□□ -0.76
LSM6-204ENST00000504181 SLC38A1Q9H2H9 487 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 TMEM38BQ9NVV0 291 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 NOP53Q9NZM5 478 aaKnown RBP10.31□□□□□ -0.76
LSM6-204ENST00000504181 GIMAP2Q9UG22 337 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 FRAS1Q86XX4 4008 aa10.31□□□□□ -0.76
LSM6-204ENST00000504181 LOC102725191A0A1B0GVB3 256 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 RBMY1BA6NDE4 496 aaKnown RBP10.3□□□□□ -0.76
LSM6-204ENST00000504181 RBMY1EA6NEQ0 496 aaKnown RBP10.3□□□□□ -0.76
LSM6-204ENST00000504181 TMEM114B3SHH9 223 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 SERPINI2O75830 405 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 FARS2O95363 451 aaKnown RBP10.3□□□□□ -0.76
LSM6-204ENST00000504181 RBMY1DP0C7P1 496 aaKnown RBP10.3□□□□□ -0.76
LSM6-204ENST00000504181 LYL1P12980 280 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 PRG2P13727 222 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 PPP1CBP62140 327 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 SLC35A2P78381 396 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 HSF2Q03933 536 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 EGFEM1PQ0D2K5 195 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 GNA13Q14344 377 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 ZNF404Q494X3 552 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 NKAPLQ5M9Q1 402 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 FAM201AQ5SY85 155 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 FRMD7Q6ZUT3 714 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 VRK2Q86Y07 508 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 NATD1Q8N6N6 113 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 ANKFN1Q8N957 763 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 HIPK4Q8NE63 616 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 ABHD4Q8TB40 342 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 MAP6Q96JE9 813 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 TECTBQ96PL2 329 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 PAFAH2Q99487 392 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 DUSP26Q9BV47 211 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 SIRPDQ9H106 197 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 TUBB1Q9H4B7 451 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 GCM1Q9NP62 436 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 EIF3KQ9UBQ5 218 aaKnown RBP10.3□□□□□ -0.76
LSM6-204ENST00000504181 IL19Q9UHD0 177 aa10.3□□□□□ -0.76
LSM6-204ENST00000504181 C5orf49A4QMS7 147 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 GOLGA6L6A8MZA4 724 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 FZD7O75084 574 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 ENTPD5O75356 428 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 TCP1P17987 556 aaKnown RBP10.29□□□□□ -0.76
LSM6-204ENST00000504181 RPS4Y1P22090 263 aaKnown RBP10.29□□□□□ -0.76
LSM6-204ENST00000504181 STOMP27105 288 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 ARRB2P32121 409 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 SERPINB9P50453 376 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 DCTN2Q13561 401 aaKnown RBP10.29□□□□□ -0.76
LSM6-204ENST00000504181 FAM69AQ5T7M9 428 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 ZNF841Q6ZN19 808 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 ZNF836Q6ZNA1 936 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 Q6ZR03 302 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 LRRC18Q8N456 261 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 VANGL1Q8TAA9 524 aaPredicted RBP10.29□□□□□ -0.76
LSM6-204ENST00000504181 CLPTM1LQ96KA5 538 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 C1orf50Q9BV19 199 aa10.29□□□□□ -0.76
LSM6-204ENST00000504181 HUWE1Q7Z6Z7 4374 aaKnown RBP10.29□□□□□ -0.76
LSM6-204ENST00000504181 A0A1W2PRX2 142 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 CDHR4A6H8M9 788 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 H3BQF6 201 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 HMGN4O00479 90 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 OR2T1O43869 369 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 NPHS1O60500 1241 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 DBIP07108 87 aaKnown RBP10.28□□□□□ -0.76
LSM6-204ENST00000504181 LMO1P25800 156 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 CDC25BP30305 580 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 PHBP35232 272 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 CRATP43155 626 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 BIDP55957 195 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 ARF6P62330 175 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 PSG7Q13046 419 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 PGS1Q32NB8 556 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 PABPC1L2AQ5JQF8 200 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 DPPA2Q7Z7J5 298 aa10.28□□□□□ -0.76
LSM6-204ENST00000504181 CALHM3Q86XJ0 350 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms