RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 POM121L2Q96KW2 1035 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 GPA33Q99795 319 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 PRSS27Q9BQR3 290 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 WFDC6Q9BQY6 131 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 CPPED1Q9BRF8 314 aaPredicted RBP5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 SIKE1Q9BRV8 207 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF747Q9BV97 191 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 EGLN1Q9GZT9 426 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 KCNN2Q9H2S1 579 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 CENPHQ9H3R5 247 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 IKZF5Q9H5V7 419 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 KAT8Q9H7Z6 458 aaKnown RBP5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 SAP30LQ9HAJ7 183 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 CDH20Q9HBT6 801 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 TMBIM4Q9HC24 238 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 DECR2Q9NUI1 292 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 TREM2Q9NZC2 230 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 CCDC167Q9P0B6 97 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 LEF1Q9UJU2 399 aaPredicted RBP5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 WIPI2Q9Y4P8 454 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 WNK2Q9Y3S1 2297 aa5.19□□□□□ -1.58
LSM3P4-201ENST00000502948 A0A1W2PRG6 482 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 PLSCR5A0PG75 271 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 POM121CA8CG34 1229 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 LRRN3E7EW58 273 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 IFNL4K9M1U5 179 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 M0QX08 132 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 WIPF1O43516 503 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 AHCYL1O43865 530 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF500O60304 480 aaPredicted RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 OR5F1O95221 314 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 CH25HO95992 272 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 CLPTM1O96005 669 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 IGHMP01871 453 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 HIST1H2ABP04908 130 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 LCKP06239 509 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 CST2P09228 141 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ACADSP16219 412 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 TNFRSF1AP19438 455 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 TCN1P20061 433 aaPredicted RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 CD247P20963 164 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 DRD4P21917 467 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 CBLP22681 906 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 STOMP27105 288 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 GCH1P30793 250 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 PCGF2P35227 344 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 APLNRP35414 380 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ZNF81P51508 661 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 CLRN1P58418 232 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 MAGOHP61326 146 aaKnown RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 CCL8P80075 99 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 RPL18Q07020 188 aaKnown RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 MAD2L1BPQ15013 274 aaPredicted RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 AWAT1Q58HT5 328 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 COQ5Q5HYK3 327 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 THEM4Q5T1C6 240 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ARMC4Q5T2S8 1044 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 DCAF12L2Q5VW00 463 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 METTL21CQ5VZV1 264 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 FAM205BPQ63HN1 556 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ARL9Q6T311 187 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 C9orf139Q6ZV77 190 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 DOK3Q7L591 496 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 HIST3H2AQ7L7L0 130 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ALDH16A1Q8IZ83 802 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 PAQR4Q8N4S7 273 aaPredicted RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 C10orf53Q8N6V4 93 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ZDHHC22Q8N966 263 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 NOXO1Q8NFA2 376 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 GPR32P1Q8NGA4 272 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 OR1J1Q8NGS3 322 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 VANGL1Q8TAA9 524 aaPredicted RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 KLF14Q8TD94 323 aaPredicted RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 IPCEF1Q8WWN9 437 aaPredicted RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ASB10Q8WXI3 467 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 HIST1H2ACQ93077 130 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 NABP1Q96AH0 204 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 COG8Q96MW5 612 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 CGREF1Q99674 301 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 SH3GL1Q99961 368 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ALG12Q9BV10 488 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 SLITRK2Q9H156 845 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 C7orf69Q9H7B7 122 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 RNF121Q9H920 327 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 ELOVL3Q9HB03 270 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 MEPEQ9NQ76 525 aaPredicted RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 TBCCD1Q9NVR7 557 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 EIF3KQ9UBQ5 218 aaKnown RBP5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 OPN4Q9UHM6 478 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 BAG5Q9UL15 447 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 HIF3AQ9Y2N7 669 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 NDUFAF1Q9Y375 327 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 UGT2A1Q9Y4X1 527 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 DOCK11Q5JSL3 2073 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 TENM1Q9UKZ4 2725 aa5.18□□□□□ -1.58
LSM3P4-201ENST00000502948 LOC105371242A0A075B767 164 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 C11orf98E9PRG8 122 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 TRMUO75648 421 aaKnown RBP5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 OR7A10O76100 309 aa5.17□□□□□ -1.58
LSM3P4-201ENST00000502948 PRSS23O95084 383 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms