RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 KDM8Q8N371 416 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 MS4A15Q8N5U1 240 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 ZIC4Q8N9L1 334 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 PHYHIPQ92561 330 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 FAM122AQ96E09 287 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 WDYHV1Q96HA8 205 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 TXNDC15Q96J42 360 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 DACH2Q96NX9 599 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 TSSK2Q96PF2 358 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 TIMP4Q99727 224 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 NIPAL2Q9H841 368 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 SLC24A3Q9HC58 644 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 TAS2R16Q9NYV7 291 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 STUB1Q9UNE7 303 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 A3GALT2U3KPV4 340 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 MPDZO75970 2070 aa8.06□□□□□ -1.12
NR1I3-216ENST00000502848 METTL15A6NJ78 407 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 RPL36A-HNRNPH2H7BZ11 118 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 OGG1O15527 345 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 SELENOFO60613 162 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 RAMP1O60894 148 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 APOL3O95236 402 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ABHD16AO95870 558 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 SERPINA3P01011 423 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 KRT8P05787 483 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 HSMCR30P0CW71 290 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ZNF823P16415 610 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 RFC3P40938 356 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 NAA10P41227 235 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ZNF84P51523 738 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 CCR9P51686 369 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ADAM8P78325 824 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 NFATC3Q12968 1075 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 TBR1Q16650 682 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 TSTQ16762 297 aaKnown RBP8.05□□□□□ -1.12
NR1I3-216ENST00000502848 RNFT1Q5M7Z0 435 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 OR2G6Q5TZ20 316 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 DMKNQ6E0U4 476 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-216ENST00000502848 PAMR1Q6UXH9 720 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 USP43Q70EL4 1123 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ABHD12BQ7Z5M8 362 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-216ENST00000502848 SYT9Q86SS6 491 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ZNF679Q8IYX0 411 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ZNF511Q8NB15 262 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 OR10H5Q8NGA6 315 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 OR6N1Q8NGY5 312 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 OR6N2Q8NGY6 317 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 OR52N5Q8NH56 324 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 CPT1CQ8TCG5 803 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 SPRYD4Q8WW59 207 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ZNRF4Q8WWF5 429 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 MCHR2Q969V1 340 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 SMIM19Q96E16 107 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 PELI1Q96FA3 418 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 C4orf36Q96KX1 117 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 KCNN2Q9H2S1 579 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 EXO5Q9H790 373 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 MRPL22Q9NWU5 206 aaKnown RBP8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ATPIF1Q9UII2 106 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 ZMIZ1Q9ULJ6 1067 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 SSR3Q9UNL2 185 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 GSTK1Q9Y2Q3 226 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 CSAG2Q9Y5P2 127 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 CFAP54Q96N23 3096 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 PCNX3Q9H6A9 2034 aa8.05□□□□□ -1.12
NR1I3-216ENST00000502848 PIEZO1Q92508 2521 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 MED13Q9UHV7 2174 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 TRDV1A0A1B0GX56 115 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 AHRRA9YTQ3 701 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 ZNF593O00488 134 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-216ENST00000502848 DHHO43323 396 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 TMEM127O75204 238 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 GATBO75879 557 aaKnown RBP8.04□□□□□ -1.12
NR1I3-216ENST00000502848 CNOT4O95628 575 aaKnown RBP8.04□□□□□ -1.12
NR1I3-216ENST00000502848 HLA-DQA2P01906 255 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 OPN1LWP04000 364 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 YES1P07947 543 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 MRPL3P09001 348 aaKnown RBP8.04□□□□□ -1.12
NR1I3-216ENST00000502848 QDPRP09417 244 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 GABRA1P14867 456 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 MSR1P21757 451 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 GADD45AP24522 165 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 SERPINB10P48595 397 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 STARP49675 285 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 SIRPAP78324 504 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 CAMK2DQ13557 499 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 CDK5R1Q15078 307 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 C1QTNF12Q5T7M4 302 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 OR2A2Q6IF42 318 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 LRFN4Q6PJG9 635 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 B3GLCTQ6Y288 498 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 ZNF627Q7L945 461 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 AAED1Q7RTV5 226 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 DPY19L4Q7Z388 723 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 DPPA2Q7Z7J5 298 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 MCEMP1Q8IX19 187 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 GHDCQ8N2G8 530 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 RBMXL3Q8N7X1 1067 aaKnown RBP8.04□□□□□ -1.12
NR1I3-216ENST00000502848 SYT14Q8NB59 555 aa8.04□□□□□ -1.12
NR1I3-216ENST00000502848 OR51L1Q8NGJ5 315 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms