RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SPRNQ5BIV9 151 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 PABPC1L2AQ5JQF8 200 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 TMEM255AQ5JRV8 349 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 GCNT6Q5T4J0 391 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 SWT1Q5T5J6 900 aaKnown RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 REEP3Q6NUK4 255 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 UNQ6126/PRO20091Q6UXV3 157 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 RANBP3LQ86VV4 465 aaPredicted RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF101Q8IZC7 436 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 PARP8Q8N3A8 854 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 OR52E2Q8NGJ4 325 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 SLC25A40Q8TBP6 338 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 KLF14Q8TD94 323 aaPredicted RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 MCHR2Q969V1 340 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 MARS2Q96GW9 593 aaKnown RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 PKP2Q99959 881 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 OR2J1Q9GZK6 312 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 PAIP1Q9H074 479 aaKnown RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 KCNN2Q9H2S1 579 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 PATZ1Q9HBE1 687 aaKnown RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 CCNB1IP1Q9NPC3 277 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 NANSQ9NR45 359 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 DCAF16Q9NXF7 216 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 TAS2R5Q9NYW4 299 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 ZIM2Q9NZV7 527 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 PDP1Q9P0J1 537 aaPredicted RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 OR5V1Q9UGF6 321 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 ZDHHC8Q9ULC8 765 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 TRIM33Q9UPN9 1127 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 MMP24Q9Y5R2 645 aa11.75□□□□□ -0.53
CCDC58-207ENST00000498466 SOX21Q9Y651 276 aaPredicted RBP11.75□□□□□ -0.53
CCDC58-207ENST00000498466 C5orf49A4QMS7 147 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 PRORSD1PA6NEY8 169 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 CH25HO95992 272 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 ADH4P08319 380 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 KITP10721 976 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 WNT5AP41221 380 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 TNFAIP6P98066 277 aaPredicted RBP11.74□□□□□ -0.53
CCDC58-207ENST00000498466 CDK6Q00534 326 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF74Q16587 644 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 ESCO2Q56NI9 601 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 ZMAT1Q5H9K5 638 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 MBNL2Q5VZF2 373 aaKnown RBP11.74□□□□□ -0.53
CCDC58-207ENST00000498466 BRICD5Q6PL45 260 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 SLC2A7Q6PXP3 512 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 KIR3DL3Q8N743 410 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 OR9I1Q8NGQ6 314 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 GTF2H4Q92759 462 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF347Q96SE7 839 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 PAIP2Q9BPZ3 127 aaKnown RBP11.74□□□□□ -0.53
CCDC58-207ENST00000498466 WFDC6Q9BQY6 131 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 SLC19A3Q9BZV2 496 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 MMP27Q9H306 513 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 BEX1Q9HBH7 125 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 MSL2Q9HCI7 577 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 TMEM106BQ9NUM4 274 aa11.74□□□□□ -0.53
CCDC58-207ENST00000498466 CGGBP1Q9UFW8 167 aaPredicted RBP11.74□□□□□ -0.53
CCDC58-207ENST00000498466 A0A1B0GUS0 222 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 MDFIC2A0A1B0GVS7 189 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 A8MXK9 166 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 M0QZ24 198 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 HOXA3O43365 443 aaPredicted RBP11.73□□□□□ -0.53
CCDC58-207ENST00000498466 HIST1H2ABP04908 130 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 CD55P08174 381 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 AQP1P29972 269 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 RBMXP38159 391 aaKnown RBP11.73□□□□□ -0.53
CCDC58-207ENST00000498466 GDI2P50395 445 aaKnown RBP11.73□□□□□ -0.53
CCDC58-207ENST00000498466 BTG1P62324 171 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 TMEM155Q4W5P6 130 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 HHATQ5VTY9 493 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 C9orf139Q6ZV77 190 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 HIST3H2AQ7L7L0 130 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 GOLGA6L1Q8N7Z2 621 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 BHLHE22Q8NFJ8 381 aaPredicted RBP11.73□□□□□ -0.53
CCDC58-207ENST00000498466 ABHD4Q8TB40 342 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 HIST1H2ACQ93077 130 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 POM121L2Q96KW2 1035 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF607Q96SK3 696 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 MCHR1Q99705 422 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 SDR39U1Q9NRG7 319 aaPredicted RBP11.73□□□□□ -0.53
CCDC58-207ENST00000498466 NOTCH1P46531 2555 aa11.73□□□□□ -0.53
CCDC58-207ENST00000498466 LOC100509620A0A075B734 347 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 MCIDASD6RGH6 385 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 KPNA4O00629 521 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-207ENST00000498466 RGS16O15492 202 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-207ENST00000498466 CHP2O43745 196 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 TIMM8AO60220 97 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-207ENST00000498466 MGRN1O60291 552 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 SERPINB7O75635 380 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 CRYBA1P05813 215 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 UMPSP11172 480 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF32P17041 273 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 CD80P33681 288 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 RAG2P55895 527 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 PPP1CBP62140 327 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 PAX8Q06710 450 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 HIST3H3Q16695 136 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms