RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 FOXG1P55316 489 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ARPP19P56211 112 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLC8A3P57103 927 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 LMO4P61968 165 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 RPS27AP62979 156 aaKnown RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 KDSRQ06136 332 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 RGS1Q08116 209 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ASPHQ12797 758 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF154Q13106 437 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 KIAA0141Q14154 515 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZIC1Q15915 447 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM83EQ2M2I3 478 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 TP53I3Q53FA7 332 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 EIPR1Q53HC9 387 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 XKR4Q5GH76 650 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 WLSQ5T9L3 541 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 LGSNQ5TDP6 509 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 METTL11BQ5VVY1 283 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 NADSYN1Q6IA69 706 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 PRSS57Q6UWY2 283 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 PAMR1Q6UXH9 720 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 TSEN54Q7Z6J9 526 aaKnown RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 VTCN1Q7Z7D3 282 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 HPS6Q86YV9 775 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 CCDC71Q8IV32 467 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 KIR3DL3Q8N743 410 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 C3orf56Q8N813 242 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 OR6S1Q8NH40 331 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 FAM81AQ8TBF8 368 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZPLD1Q8TCW7 415 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 LKAAEAR1Q8TD35 194 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 NUDCD2Q8WVJ2 157 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 TOMM40LQ969M1 308 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 TMEM143Q96AN5 459 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 KIAA1143Q96AT1 154 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 RMND5BQ96G75 393 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 SDSLQ96GA7 329 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 LYZL4Q96KX0 146 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 TSNARE1Q96NA8 513 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 CABLES2Q9BTV7 478 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 C20orf24Q9BUV8 137 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 TSSK1BQ9BXA7 367 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 KRTAP4-6Q9BYQ5 205 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 WDR13Q9H1Z4 485 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF385DQ9H6B1 395 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 RANBP3Q9H6Z4 567 aaPredicted RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 PLEKHA3Q9HB20 300 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 C3orf14Q9HBI5 128 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 POPDC2Q9HBU9 364 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 AMBNQ9NP70 447 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 AGPAT4Q9NRZ5 378 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 DEPPQ9NTK1 212 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 NDE1Q9NXR1 346 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 SLC7A8Q9UHI5 535 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 L3MBTL1Q9Y468 752 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ALG6Q9Y672 507 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 MAD1L1Q9Y6D9 718 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 CSNK1G3Q9Y6M4 447 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 FREM1Q5H8C1 2179 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZNF638Q14966 1978 aaKnown RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 BAZ2AQ9UIF9 1905 aaKnown RBP1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 PLIN4Q96Q06 1357 aa1.97□□□□□ -2.09
CKS1BP2-201ENST00000497342 ZBED9Q6R2W3 1325 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 MYOFQ9NZM1 2061 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 IGHV4-30-2A0A087WSY4 118 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 IGKV6D-21A0A0A0MT36 114 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 LCE6AA0A183 80 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 A0A1B0GWB2 263 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 A0A1W2PPV4 95 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 IGLON5A6NGN9 336 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 ZNF99A8MXY4 864 aaPredicted RBP1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 C10orf142B7Z368 130 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 D6RAR5 112 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 BMPR1BO00238 502 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 SLC17A2O00624 439 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 CASKO14936 926 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 CHMP2AO43633 222 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 NMT2O60551 498 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 RAD1O60671 282 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 C1orf105O95561 183 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 POP4O95707 220 aaKnown RBP1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 SEMA4FO95754 770 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 GNA14O95837 355 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 NUDT14O95848 222 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 NPPAP01160 153 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 CD55P08174 381 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 ACADSP16219 412 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 GSTM3P21266 225 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 TUBG1P23258 451 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 YWHABP31946 246 aaKnown RBP1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 FOXN2P32314 431 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 LONP1P36776 959 aaKnown RBP1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 ANP32AP39687 249 aaKnown RBP1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 ELK3P41970 407 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 GNPDA1P46926 289 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 NOVP48745 357 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 MRPL19P49406 292 aaKnown RBP1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 THBS3P49746 956 aa1.96□□□□□ -2.1
CKS1BP2-201ENST00000497342 ATP4BP51164 291 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms