RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 GMNNO75496 209 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 H1F0P07305 194 aaKnown RBP13.52□□□□□ -0.25
HDAC4-213ENST00000496347 ADRA2AP08913 450 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 IGHV4-31P0DP07 118 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 NCK1P16333 377 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 FUT4P22083 530 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 GPR4P46093 362 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 HSF2Q03933 536 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 FHL1Q13642 323 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 LAPTM4AQ15012 233 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 RGS7BPQ6MZT1 257 aaPredicted RBP13.52□□□□□ -0.25
HDAC4-213ENST00000496347 TMPRSS11FQ6ZWK6 438 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 HIPK1Q86Z02 1210 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 ZNF786Q8N393 782 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 OR51A7Q8NH64 312 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 TSPAN32Q96QS1 320 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 SYT3Q9BQG1 590 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 BCL2L14Q9BZR8 327 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 MS4A5Q9H3V2 200 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 CCNB1IP1Q9NPC3 277 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 KRCC1Q9NPI7 259 aaPredicted RBP13.52□□□□□ -0.25
HDAC4-213ENST00000496347 DCAF13Q9NV06 445 aaKnown RBP13.52□□□□□ -0.25
HDAC4-213ENST00000496347 ADA2Q9NZK5 511 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 NDUFAF4Q9P032 175 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 MAGEL2Q9UJ55 1249 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 CDC42EP3Q9UKI2 254 aa13.52□□□□□ -0.25
HDAC4-213ENST00000496347 FAM32AQ9Y421 112 aaKnown RBP13.52□□□□□ -0.25
HDAC4-213ENST00000496347 IGHV4-61A0A0C4DH41 118 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 A0A1W2PPW3 197 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 IGFBP1P08833 259 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-213ENST00000496347 APEHP13798 732 aaKnown RBP13.51□□□□□ -0.25
HDAC4-213ENST00000496347 HSD17B1P14061 328 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 ZNF16P17020 682 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-213ENST00000496347 ZNF23P17027 643 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 RHCEP18577 417 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 SELENOVP59797 346 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 CTXN1P60606 82 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 CHRFAM7AQ494W8 412 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 CYB5R2Q6BCY4 276 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 SLC25A47Q6Q0C1 308 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 FOXL2NBQ6ZUU3 175 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 RRM2BQ7LG56 351 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 IGFN1Q86VF2 1251 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 PGAM4Q8N0Y7 254 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 LRRC18Q8N456 261 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 PAQR4Q8N4S7 273 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-213ENST00000496347 SLC7A13Q8TCU3 470 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 NSMAFQ92636 917 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 FOXN4Q96NZ1 517 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 RBP7Q96R05 134 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 NDE1Q9NXR1 346 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 REV1Q9UBZ9 1251 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 EGFL7Q9UHF1 273 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 GPR160Q9UJ42 338 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 ADAM21Q9UKJ8 722 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 SVEP1Q4LDE5 3571 aa13.51□□□□□ -0.25
HDAC4-213ENST00000496347 IGKV1D-43A0A0B4J1Z2 117 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 SH3PXD2BA1X283 911 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 CDC42EP2O14613 210 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 AHCYL1O43865 530 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 STAMBPO95630 424 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 CD14P08571 375 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 FAM157BP0CG42 384 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 ZNF250P15622 560 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 ITGA2P17301 1181 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 CDAP32320 146 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 APLNRP35414 380 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 RPL4P36578 427 aaKnown RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 GUCA1AP43080 201 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 RAD52P43351 418 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 LIMS1P48059 325 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 KLF3P57682 345 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 PCBD1P61457 104 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 GNGT1P63211 74 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 MRPS11P82912 194 aaKnown RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 ZBED5Q49AG3 693 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 IQCCQ4KMZ1 466 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 PABPC1L2AQ5JQF8 200 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 FGD3Q5JSP0 725 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 SAMD4BQ5PRF9 694 aaKnown RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 FAM27BQ5VT28 67 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 GLYATQ6IB77 296 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 UNQ6126/PRO20091Q6UXV3 157 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 TSEN54Q7Z6J9 526 aaKnown RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 MEX3DQ86XN8 651 aaKnown RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 ZCCHC24Q8N2G6 241 aaKnown RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 ARIH2OSQ8N7S6 290 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 UBASH3BQ8TF42 649 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 DHRS1Q96LJ7 313 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 LRRC37BQ96QE4 947 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 GPX7Q96SL4 187 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 TPK1Q9H3S4 243 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 GORASP2Q9H8Y8 452 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 GRHPRQ9UBQ7 328 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 LPAR3Q9UBY5 353 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 ARL2BPQ9Y2Y0 163 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 FBN1P35555 2871 aaKnown RBP13.5□□□□□ -0.25
HDAC4-213ENST00000496347 CUBNO60494 3623 aa13.5□□□□□ -0.25
HDAC4-213ENST00000496347 IGLV3-9A0A075B6K5 115 aa13.49□□□□□ -0.25
HDAC4-213ENST00000496347 XKRYO14609 159 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms