RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 KLRF1Q9NZS2 232 aa9.96□□□□□ -0.82
CMSS1-208ENST00000496116 NPIPB13A6NJU9 1138 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 NPIPB4C9JG80 1138 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 PRAF2O60831 178 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 TIAF1O95411 115 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 CD2P06729 351 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF823P16415 610 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 MSX1P28360 303 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 DLX5P56178 289 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 TAS2R20P59543 309 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 CCL7P80098 99 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 OR7A5Q15622 319 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ETFDHQ16134 617 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 BTBD16Q32M84 506 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ELFN2Q5R3F8 820 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 KANSL1Q7Z3B3 1105 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 OR52N5Q8NH56 324 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 PMEPA1Q969W9 287 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 C8orf44Q96CB5 159 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 IER2Q9BTL4 223 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ABHD6Q9BV23 337 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 SDHAF3Q9NRP4 125 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 PTTG3PQ9NZH4 202 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 MRPL15Q9P015 296 aaKnown RBP9.95□□□□□ -0.82
CMSS1-208ENST00000496116 MED11Q9P086 117 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 CKLFQ9UBR5 152 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 C19orf25Q9UFG5 118 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-208ENST00000496116 DHDHQ9UQ10 334 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 VDAC3Q9Y277 283 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 COA3Q9Y2R0 106 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ALPK2Q86TB3 2170 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 CACNA1EQ15878 2313 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 IGHV5-10-1A0A0J9YXX1 117 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 A0A1W2PQM1 296 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 MS4A18H0YCH9 400 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 SMLR1H3BR10 107 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 FABP7O15540 132 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 XRCC3O43542 346 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF354AO60765 605 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-208ENST00000496116 PEX14O75381 377 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 PSMB1P20618 241 aaKnown RBP9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF41P51814 821 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-208ENST00000496116 TLE3Q04726 772 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 MS4A18Q3C1V0 323 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 Q5BKY6 102 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 OR7E24Q6IFN5 339 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 CPEB2Q7Z5Q1 589 aaKnown RBP9.95□□□□□ -0.82
CMSS1-208ENST00000496116 PPP1R3BQ86XI6 285 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 OR11H7Q8NGC8 314 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 DEDD2Q8WXF8 326 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ASB10Q8WXI3 467 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ATOH1Q92858 354 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-208ENST00000496116 GCDHQ92947 438 aaPredicted RBP9.95□□□□□ -0.82
CMSS1-208ENST00000496116 ARL5BQ96KC2 179 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 PPP4R1LQ9P1A2 415 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 KLK11Q9UBX7 282 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 HSPB11Q9Y547 144 aa9.95□□□□□ -0.82
CMSS1-208ENST00000496116 LAMA1P25391 3075 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 CCDC163A0A0D9SF12 145 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 A0A1B0GVI7 797 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 ANKRD20A5PA0PJZ0 165 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 TTLL8A6PVC2 850 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 H3BSH0 61 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 SIGLEC6O43699 453 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 SSNA1O43805 119 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF780AO75290 641 aaPredicted RBP9.94□□□□□ -0.82
CMSS1-208ENST00000496116 ZFAND5O76080 213 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 HLA-DOBP13765 273 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 IFNGR1P15260 489 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 IL11P20809 199 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 FAUP35544 74 aaKnown RBP9.94□□□□□ -0.82
CMSS1-208ENST00000496116 OTPQ5XKR4 325 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 OLFML2AQ68BL7 652 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 SFRP4Q6FHJ7 346 aaPredicted RBP9.94□□□□□ -0.82
CMSS1-208ENST00000496116 ARSKQ6UWY0 536 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 CREB3L2Q70SY1 520 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 NDUFAF7Q7L592 441 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 CATSPERDQ86XM0 798 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 KDM8Q8N371 416 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 SAP25Q8TEE9 199 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 NAT6Q93015 286 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 RELTQ969Z4 430 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 C5orf34Q96MH7 638 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 CRB3Q9BUF7 120 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 CHST11Q9NPF2 352 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 DIABLOQ9NR28 239 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 ALKBH4Q9NXW9 302 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 SLC22A13Q9Y226 551 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 LRP12Q9Y561 859 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 CACNA1CQ13936 2221 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 TMEM200CA6NKL6 621 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 A6NL46 340 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 AQP8O94778 261 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 GLSO94925 669 aaPredicted RBP9.94□□□□□ -0.82
CMSS1-208ENST00000496116 ONECUT2O95948 504 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 PNPP00491 289 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 SYPP08247 313 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 CYC1P08574 325 aa9.94□□□□□ -0.82
CMSS1-208ENST00000496116 HSF1Q00613 529 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms