RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	CFD	P00746	253 aa	Predicted RBP	10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	HRH2	P25021	359 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	DLX5	P56178	289 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	CLDN20	P56880	219 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLC10A1	Q14973	349 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	ST3GAL2	Q16842	350 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	CYBRD1	Q53TN4	286 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	C1orf189	Q5VU69	101 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	PAMR1	Q6UXH9	720 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	CBR4	Q8N4T8	237 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	RAB1C	Q92928	201 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	SAT2	Q96F10	170 aa	Predicted RBP	10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	NPAS2	Q99743	824 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	NDC1	Q9BTX1	674 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	SYNPO2L	Q9H987	977 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	ING1	Q9UK53	422 aa	Predicted RBP	10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	ACSL6	Q9UKU0	697 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	EPG5	Q9HCE0	2579 aa		10.52	□□□□□ -0.73
BRCA1-222	ENST00000493919	MDC1	Q14676	2089 aa	Known RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	TRBV11-1	A0A0K0K1C0	115 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919		H0YGG7	62 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	MRAS	O14807	208 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	TGOLN2	O43493	480 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR1F1	O43749	312 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	SERPIND1	P05546	499 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	SERPINA2	P20848	420 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	GGT2	P36268	569 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	BCL6	P41182	706 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	RPS20	P60866	119 aa	Known RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	RPS15A	P62244	130 aa	Known RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	HNRNPA0	Q13151	305 aa	Known RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	GAMT	Q14353	236 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	XKR6	Q5GH73	641 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	FAM198B	Q6UWH4	519 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	LRRC69	Q6ZNQ3	347 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	METTL27	Q8N6F8	245 aa	Predicted RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	CSNK1A1L	Q8N752	337 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLC38A9	Q8NBW4	561 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	ZNF740	Q8NDX6	193 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR8U1	Q8NH10	309 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	UBTD2	Q8WUN7	234 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	GLMP	Q8WWB7	406 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	FAM110A	Q9BQ89	295 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	UTP23	Q9BRU9	249 aa	Known RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	URM1	Q9BTM9	101 aa	Known RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	PELI2	Q9HAT8	420 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	RCC2	Q9P258	522 aa	Known RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	IL17B	Q9UHF5	180 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	ZFP30	Q9Y2G7	519 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	ATG4B	Q9Y4P1	393 aa		10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919	TBL2	Q9Y4P3	447 aa	Known RBP	10.51	□□□□□ -0.73
BRCA1-222	ENST00000493919		A0A1W2PQL4	384 aa	Predicted RBP	10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	C20orf202	A1L168	122 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	CLEC18A	A5D8T8	446 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919		A8MT66	165 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	RAMP3	O60896	148 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	CA11	O75493	328 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	FGF7	P21781	194 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	CERS1	P27544	350 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	NCS1	P62166	190 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	MRPS10	P82664	201 aa	Known RBP	10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	C2orf80	Q0P641	193 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	SRSF6	Q13247	344 aa	Known RBP	10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	CLEC18B	Q6UXF7	455 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	WDR88	Q6ZMY6	472 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	TTLL10	Q6ZVT0	673 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLC35D2	Q76EJ3	337 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	DTX1	Q86Y01	620 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	SPACA3	Q8IXA5	215 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	KLHDC8A	Q8IYD2	350 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	ACBD7	Q8N6N7	88 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	CLEC18C	Q8NCF0	446 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR10H4	Q8NGA5	316 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR11L1	Q8NGX0	322 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	NUBPL	Q8TB37	319 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	TMEM234	Q8WY98	164 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	NKD1	Q969G9	470 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	MALSU1	Q96EH3	234 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	FAM120B	Q96EK7	910 aa	Known RBP	10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	FBXL20	Q96IG2	436 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	RDH12	Q96NR8	316 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	OR2A5	Q96R48	311 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	MACROD1	Q9BQ69	325 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	SLC35A5	Q9BS91	424 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	MARVELD1	Q9BSK0	173 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	VCX2	Q9H322	139 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	TMEM38A	Q9H6F2	299 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	SRPK3	Q9UPE1	567 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	POMT1	Q9Y6A1	747 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	ATP23	Q9Y6H3	246 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	URB1	O60287	2271 aa	Known RBP	10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	ITPR1	Q14643	2758 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	TCRBV16S1A1N1	A0A5B0	115 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	COLCA2	A8K830	154 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919		H3BMH7	237 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	SMLR1	H3BR10	107 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	P2RX6	O15547	441 aa		10.5	□□□□□ -0.73
BRCA1-222	ENST00000493919	NDUFS4	O43181	175 aa		10.5	□□□□□ -0.73

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