RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 SLC36A2Q495M3 483 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 CLEC12AQ5QGZ9 265 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 TMEM53Q6P2H8 277 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 RASSF6Q6ZTQ3 369 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 PTCHD4Q6ZW05 846 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 SLC16A14Q7RTX9 510 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 DPPA2Q7Z7J5 298 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 TMEM179BQ7Z7N9 219 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 MYPOPQ86VE0 399 aaPredicted RBP11.12□□□□□ -0.63
CLIP2-209ENST00000493166 JAZF1Q86VZ6 243 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 LRRC18Q8N456 261 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 UTP4Q969X6 686 aaKnown RBP11.12□□□□□ -0.63
CLIP2-209ENST00000493166 FEVQ99581 238 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 SYT4Q9H2B2 425 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 KCNN2Q9H2S1 579 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 RNF121Q9H920 327 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 SIAEQ9HAT2 523 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 NOX3Q9HBY0 568 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 CISD1Q9NZ45 108 aaKnown RBP11.12□□□□□ -0.63
CLIP2-209ENST00000493166 FBXL3Q9UKT7 428 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 MOKQ9UQ07 419 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 ATP23Q9Y6H3 246 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 CCDC168Q8NDH2 2452 aa11.12□□□□□ -0.63
CLIP2-209ENST00000493166 VPS13CQ709C8 3753 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 ARPC3O15145 178 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 IDH3BO43837 385 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 MGRN1O60291 552 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 SOX14O95416 240 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 RENP00797 406 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 HIST1H1CP16403 213 aaKnown RBP11.11□□□□□ -0.63
CLIP2-209ENST00000493166 CDKN2AP42771 156 aaKnown RBP11.11□□□□□ -0.63
CLIP2-209ENST00000493166 GIPRP48546 466 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 LEG1Q6P5S2 330 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 B3GLCTQ6Y288 498 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 HS3ST5Q8IZT8 346 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 IL17RDQ8NFM7 739 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 SMAP2Q8WU79 429 aaPredicted RBP11.11□□□□□ -0.63
CLIP2-209ENST00000493166 TMEM171Q8WVE6 324 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 PIGTQ969N2 578 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 NABP1Q96AH0 204 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 MBD6Q96DN6 1003 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 NIPSNAP1Q9BPW8 284 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 PLA2G12AQ9BZM1 189 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 RERGLQ9H628 205 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 ZNF556Q9HAH1 456 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 CCNB1IP1Q9NPC3 277 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 FAIMQ9NVQ4 179 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 ARMC1Q9NVT9 282 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 IL20Q9NYY1 176 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 VSX1Q9NZR4 365 aaPredicted RBP11.11□□□□□ -0.63
CLIP2-209ENST00000493166 AP4S1Q9Y587 144 aa11.11□□□□□ -0.63
CLIP2-209ENST00000493166 E7EQL1 145 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 SLC16A7O60669 478 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 KHDRBS3O75525 346 aaKnown RBP11.1□□□□□ -0.63
CLIP2-209ENST00000493166 FCGR1AP12314 374 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 CTLA4P16410 223 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 ZNF14P17017 642 aaPredicted RBP11.1□□□□□ -0.63
CLIP2-209ENST00000493166 FASP25445 335 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 CALCRP30988 508 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 FABP6P51161 128 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 ART1P52961 327 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 COX10Q12887 443 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 RAB39AQ14964 217 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 ATP6AP1Q15904 470 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 ETFDHQ16134 617 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 DEFB113Q30KQ7 82 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 SLC35F1Q5T1Q4 408 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 SHQ1Q6PI26 577 aaKnown RBP11.1□□□□□ -0.63
CLIP2-209ENST00000493166 DNM1P34Q6PK57 102 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 CD300LDQ6UXZ3 194 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 FOXL2NBQ6ZUU3 175 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 SDR9C7Q8NEX9 313 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 OR8D4Q8NGM9 314 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 OR4K13Q8NH42 304 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 TEX47Q8TBZ9 253 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 DUS3LQ96G46 650 aaKnown RBP11.1□□□□□ -0.63
CLIP2-209ENST00000493166 MS4A3Q96HJ5 214 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 ZNF75AQ96N20 296 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 RAB3IPQ96QF0 476 aaPredicted RBP11.1□□□□□ -0.63
CLIP2-209ENST00000493166 NMNAT3Q96T66 252 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 DHRS9Q9BPW9 319 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 TSSK6Q9BXA6 273 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 BEX4Q9NWD9 120 aaPredicted RBP11.1□□□□□ -0.63
CLIP2-209ENST00000493166 KIF17Q9P2E2 1029 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 LAMP3Q9UQV4 416 aa11.1□□□□□ -0.63
CLIP2-209ENST00000493166 IGHV2OR16-5A0A0B4J2B6 119 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 H3BN98 237 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 BHLHE40O14503 412 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 SMPD2O60906 423 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 SERPINA5P05154 406 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 IGFBP1P08833 259 aaPredicted RBP11.09□□□□□ -0.63
CLIP2-209ENST00000493166 ANXA8P13928 327 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 MSR1P21757 451 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 LAP3P28838 519 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 CRABP1P29762 137 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 CENPAP49450 140 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 HSF2Q03933 536 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 PLP2Q04941 152 aa11.09□□□□□ -0.63
CLIP2-209ENST00000493166 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms