RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 RERGLQ9H628 205 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 RNF167Q9H6Y7 350 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 ZNF71Q9NQZ8 489 aaPredicted RBP12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 TUBD1Q9UJT1 453 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 PEX16Q9Y5Y5 336 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 ZNF726A6NNF4 738 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 ZNF716A6NP11 495 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 AQP7O14520 342 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 CYTIPO60759 359 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 IGHG1P01857 330 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 MYL12AP19105 171 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 PYCR1P32322 319 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 S100A5P33763 92 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 CLDN17P56750 224 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 RNLSQ5VYX0 342 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 WDFY1Q8IWB7 410 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 POMGNT2Q8NAT1 580 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 ZNRF4Q8WWF5 429 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 PNPLA2Q96AD5 504 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 MRPL13Q9BYD1 178 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 ADGRL4Q9HBW9 690 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 ABCB10Q9NRK6 738 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 PLSCR2Q9NRY7 297 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 CAMK2AQ9UQM7 478 aa12.53□□□□□ -0.4
PDZRN3-210ENST00000492909 FAM171A2A8MVW0 826 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 ERVH48-1M5A8F1 160 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 SLC16A7O60669 478 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 IGHA1P01876 353 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 MRPL3P09001 348 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 SBK2P0C263 348 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 PGA4P0DJD7 388 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 PGA3P0DJD8 388 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 CRABP1P29762 137 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 SOX6P35712 828 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 ETV6P41212 452 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 CLRN1P58418 232 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 RASGEF1BQ0VAM2 473 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 CAMK2DQ13557 499 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 GGTLC2Q14390 218 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 SSX1Q16384 188 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 C3AR1Q16581 482 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 LINC01590Q5TEZ4 76 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 DNM1P34Q6PK57 102 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 SARAFQ96BY9 339 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 OPALINQ96PE5 141 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNF385AQ96PM9 386 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 RBP7Q96R05 134 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 CNN2Q99439 309 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 POLE4Q9NR33 117 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 LUZP4Q9P127 313 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 B9D1Q9UPM9 204 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 LSM2Q9Y333 95 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 EXOSC1Q9Y3B2 195 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 FLVCR1Q9Y5Y0 555 aa12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 PRRC2CQ9Y520 2896 aaKnown RBP12.52□□□□□ -0.41
PDZRN3-210ENST00000492909 CENPBD1B2RD01 187 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 J3QRE1 110 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 AKAP8O43823 692 aaKnown RBP12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 SCG5P05408 212 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 NR2C1P13056 603 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 CTLA4P16410 223 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 CENPAP49450 140 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 PARP16Q8N5Y8 322 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 ACBD7Q8N6N7 88 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 NOXO1Q8NFA2 376 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 FNDC9Q8TBE3 224 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 RNF128Q8TEB7 428 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 ABHD3Q8WU67 409 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 JAM3Q9BX67 310 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 PRRG4Q9BZD6 226 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 PRDM14Q9GZV8 571 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 IGLV1-36A0A0B4J1U3 117 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 MYL12BO14950 172 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 TBX1O43435 398 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 WISP2O76076 250 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 ETV1P50549 477 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 BLVRAP53004 296 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 FMODQ06828 376 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 DOC2BQ14184 412 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 CARD17Q5XLA6 110 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 STEAP3Q658P3 488 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 FAM180AQ6UWF9 173 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 BBC3Q96PG8 261 aaPredicted RBP12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 MND1Q9BWT6 205 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 KLHL9Q9P2J3 617 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 CLEC2DQ9UHP7 191 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 PAIP2BQ9ULR5 123 aaKnown RBP12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 RCE1Q9Y256 329 aa12.51□□□□□ -0.41
PDZRN3-210ENST00000492909 SVILO95425 2214 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 A0A075B6Q4 140 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 A0A1B0GTH9 108 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 PNMA8CA0A1B0GUJ8 204 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 OR14I1A6ND48 311 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 C12orf71A8MTZ7 269 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 GPR171O14626 319 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 GPX5O75715 221 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 LIMS3P0CW19 117 aa12.5□□□□□ -0.41
PDZRN3-210ENST00000492909 LIMS4P0CW20 117 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms