RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 VIMP08670 466 aaKnown RBP9.3□□□□□ -0.92
SND1-215ENST00000492772 MMP7P09237 267 aaPredicted RBP9.3□□□□□ -0.92
SND1-215ENST00000492772 CCNOP22674 350 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 STOMP27105 288 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 MPV17P39210 176 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 MTNR1AP48039 350 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 VSNL1P62760 191 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 SCARB2Q14108 478 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 HIST3H3Q16695 136 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 TMEM155Q4W5P6 130 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 PABPC1L2AQ5JQF8 200 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 KLF17Q5JT82 389 aaPredicted RBP9.3□□□□□ -0.92
SND1-215ENST00000492772 SPATA46Q5T0L3 261 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 LRIF1Q5T3J3 769 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 MBNL2Q5VZF2 373 aaKnown RBP9.3□□□□□ -0.92
SND1-215ENST00000492772 SLC2A7Q6PXP3 512 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 LINC00114Q6XXX2 140 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 ARMC8Q8IUR7 673 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 MCHR2Q969V1 340 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 MARS2Q96GW9 593 aaKnown RBP9.3□□□□□ -0.92
SND1-215ENST00000492772 ZNF48Q96MX3 618 aaPredicted RBP9.3□□□□□ -0.92
SND1-215ENST00000492772 PAIP2Q9BPZ3 127 aaKnown RBP9.3□□□□□ -0.92
SND1-215ENST00000492772 SLC19A3Q9BZV2 496 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 MS4A7Q9GZW8 240 aaPredicted RBP9.3□□□□□ -0.92
SND1-215ENST00000492772 TMEM38AQ9H6F2 299 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 KCNK9Q9NPC2 374 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 CCNB1IP1Q9NPC3 277 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 NANSQ9NR45 359 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 TAS2R5Q9NYW4 299 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 OR5V1Q9UGF6 321 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 ZNF229Q9UJW7 825 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 CORO2BQ9UQ03 480 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 INSIG2Q9Y5U4 225 aa9.3□□□□□ -0.92
SND1-215ENST00000492772 NOTCH1P46531 2555 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 A0A1B0GUS0 222 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 MCIDASD6RGH6 385 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 TPST2O60704 377 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 SNNO75324 88 aaPredicted RBP9.29□□□□□ -0.92
SND1-215ENST00000492772 CH25HO95992 272 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 HIST1H2ABP04908 130 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 KITP10721 976 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 SLC6A2P23975 617 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 WNT5AP41221 380 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 GDI2P50395 445 aaKnown RBP9.29□□□□□ -0.92
SND1-215ENST00000492772 MRPS34P82930 218 aaKnown RBP9.29□□□□□ -0.92
SND1-215ENST00000492772 MPP2Q14168 576 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 SLC9A3R2Q15599 337 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 THEM4Q5T1C6 240 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 C10orf128Q5T292 105 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 LEG1Q6P5S2 330 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 TTC33Q6PID6 262 aaPredicted RBP9.29□□□□□ -0.92
SND1-215ENST00000492772 C9orf139Q6ZV77 190 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 HIST3H2AQ7L7L0 130 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 NANOGNBQ7Z5D8 188 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 ZNF101Q8IZC7 436 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 BCL6BQ8N143 479 aaPredicted RBP9.29□□□□□ -0.92
SND1-215ENST00000492772 LRRC18Q8N456 261 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 HIPK4Q8NE63 616 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 SLC25A40Q8TBP6 338 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 KLF14Q8TD94 323 aaPredicted RBP9.29□□□□□ -0.92
SND1-215ENST00000492772 GEMIN6Q8WXD5 167 aaKnown RBP9.29□□□□□ -0.92
SND1-215ENST00000492772 HIST1H2ACQ93077 130 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 SEPHS2Q99611 448 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 MCHR1Q99705 422 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 SIAEQ9HAT2 523 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 PATZ1Q9HBE1 687 aaKnown RBP9.29□□□□□ -0.92
SND1-215ENST00000492772 NPHS2Q9NP85 383 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 MMP26Q9NRE1 261 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 SLC25A37Q9NYZ2 338 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 STX18Q9P2W9 335 aaKnown RBP9.29□□□□□ -0.92
SND1-215ENST00000492772 ANGPT4Q9Y264 503 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 MMP24Q9Y5R2 645 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 GMEB1Q9Y692 573 aa9.29□□□□□ -0.92
SND1-215ENST00000492772 A0A1W2PRG6 482 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 C5orf49A4QMS7 147 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 GMNCA6NCL1 334 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 TRAPPC2LH3BP13 241 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 ICMTO60725 284 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 SBK2P0C263 348 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 ASAH2BP0C7U1 165 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 PPIAL4GP0DN37 164 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 UMPSP11172 480 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 NR2C1P13056 603 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 MDKP21741 143 aaPredicted RBP9.28□□□□□ -0.92
SND1-215ENST00000492772 TNFSF4P23510 183 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 AQP1P29972 269 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 SLC6A9P48067 706 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 DAP3P51398 398 aaKnown RBP9.28□□□□□ -0.92
SND1-215ENST00000492772 ZNF133P52736 654 aaPredicted RBP9.28□□□□□ -0.92
SND1-215ENST00000492772 STX1BP61266 288 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 TNFAIP6P98066 277 aaPredicted RBP9.28□□□□□ -0.92
SND1-215ENST00000492772 ESCO2Q56NI9 601 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 TMEM255AQ5JRV8 349 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 RFPL4BQ6ZWI9 263 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 SPATC1Q76KD6 591 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 ZER1Q7Z7L7 766 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 MSRB3Q8IXL7 192 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 C10orf111Q8N326 155 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 PARP8Q8N3A8 854 aa9.28□□□□□ -0.92
SND1-215ENST00000492772 MREGQ8N565 214 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms