RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 OR6X1Q8NH79 312 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 MAL2Q969L2 176 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 CMTM3Q96MX0 182 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 C7orf26Q96N11 449 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 FOXB1Q99853 325 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 SIKE1Q9BRV8 207 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 SOX7Q9BT81 388 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF416Q9BWM5 594 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 ULBP2Q9BZM5 246 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 RACGAP1Q9H0H5 632 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 C1orf198Q9H425 327 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 NTN4Q9HB63 628 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 SLC25A37Q9NYZ2 338 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 SEC14L4Q9UDX3 406 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 METRNQ9UJH8 293 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 SLC13A4Q9UKG4 626 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 USH1CQ9Y6N9 552 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 ARFGEF3Q5TH69 2177 aa7.86□□□□□ -1.15
HDAC3-212ENST00000492407 TRBV5-3A0A0A0MS03 114 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 PLPP3O14495 311 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 BET1O15155 118 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 CRYZL1O95825 349 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 HPRP00739 348 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 HLA-HP01893 362 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 SERPINA5P05154 406 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 CD79AP11912 226 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 ANPEPP15144 967 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 GPR6P46095 362 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-212ENST00000492407 ATP4BP51164 291 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 RGS8P57771 180 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-212ENST00000492407 TSPAN5P62079 268 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 SCRN3Q0VDG4 424 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 LSAMPQ13449 338 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 PCGF3Q3KNV8 242 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 ELFN2Q5R3F8 820 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 PHYHD1Q5SRE7 291 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 KRT80Q6KB66 452 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 IL17RELQ6ZVW7 336 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 HDXQ7Z353 690 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 CLVS1Q8IUQ0 354 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-212ENST00000492407 ARMC8Q8IUR7 673 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 FUNDC1Q8IVP5 155 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 SLC30A8Q8IWU4 369 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 MSRB3Q8IXL7 192 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 ZCCHC24Q8N2G6 241 aaKnown RBP7.85□□□□□ -1.15
HDAC3-212ENST00000492407 HIPK4Q8NE63 616 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 OR5J2Q8NH18 312 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 NFKBIDQ8NI38 313 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 TMEM54Q969K7 222 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 TLCD1Q96CP7 247 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 OPALINQ96PE5 141 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 SNX18Q96RF0 628 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 RSPO3Q9BXY4 272 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-212ENST00000492407 MRPL37Q9BZE1 423 aaKnown RBP7.85□□□□□ -1.15
HDAC3-212ENST00000492407 SLC19A3Q9BZV2 496 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 SLC52A3Q9NQ40 469 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 RHBDL2Q9NX52 303 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 GRIP1Q9Y3R0 1128 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 DMRT1Q9Y5R6 373 aa7.85□□□□□ -1.15
HDAC3-212ENST00000492407 HEATR1Q9H583 2144 aaKnown RBP7.85□□□□□ -1.15
HDAC3-212ENST00000492407 SH3PXD2BA1X283 911 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 ANKRD34BA5PLL1 514 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 NDUFA2O43678 99 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 GATCO43716 136 aaKnown RBP7.84□□□□□ -1.15
HDAC3-212ENST00000492407 CHP2O43745 196 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 TPST1O60507 370 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 MFN2O95140 757 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 OR6A2O95222 327 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 FARS2O95363 451 aaKnown RBP7.84□□□□□ -1.15
HDAC3-212ENST00000492407 PTHP01270 115 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 MSMBP08118 114 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 OR8G3PP0DMU2 310 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 HLA-DOBP13765 273 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 IL2RGP31785 369 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 IFNA8P32881 189 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 CSNK1A1P48729 337 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 CDH12P55289 794 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 RAB14P61106 215 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 MAGOHP61326 146 aaKnown RBP7.84□□□□□ -1.15
HDAC3-212ENST00000492407 CAMK2DQ13557 499 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 MAJINQ3KP22 176 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 PGM2L1Q6PCE3 622 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 USP43Q70EL4 1123 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 CROCCP3Q8IVE0 287 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 C1orf174Q8IYL3 243 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 SLC22A24Q8N4F4 322 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 OR1J2Q8NGS2 313 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 TMEM186Q96B77 213 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 SLC25A44Q96H78 314 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-212ENST00000492407 TXNDC15Q96J42 360 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 EMC6Q9BV81 110 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 TRIM15Q9C019 465 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 VIPAS39Q9H9C1 493 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 SLCO1B3Q9NPD5 702 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 MED29Q9NX70 200 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 SLCO1C1Q9NYB5 712 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 GLTPQ9NZD2 209 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 ZNF224Q9NZL3 707 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 VAPAQ9P0L0 249 aa7.84□□□□□ -1.15
HDAC3-212ENST00000492407 ANGPT4Q9Y264 503 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms