RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 NOX3Q9HBY0 568 aa11.02□□□□□ -0.65
SEC61A1-206ENST00000491668 MED29Q9NX70 200 aa11.02□□□□□ -0.65
SEC61A1-206ENST00000491668 OAZ3Q9UMX2 235 aa11.02□□□□□ -0.65
SEC61A1-206ENST00000491668 RRP15Q9Y3B9 282 aaKnown RBP11.02□□□□□ -0.65
SEC61A1-206ENST00000491668 NOX1Q9Y5S8 564 aa11.02□□□□□ -0.65
SEC61A1-206ENST00000491668 CUBNO60494 3623 aa11.02□□□□□ -0.65
SEC61A1-206ENST00000491668 A0A1W2PRG6 482 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 SLC35F4A4IF30 521 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 MCIDASD6RGH6 385 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 M0R3G1 203 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 GPRIN2O60269 458 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 F13BP05160 661 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 APOBEC3AP31941 199 aaPredicted RBP11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 SH3BGRP55822 239 aaPredicted RBP11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 NAAAQ02083 359 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 POU3F1Q03052 451 aaPredicted RBP11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 ALG10Q5BKT4 473 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 CARD17Q5XLA6 110 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 SMARCD3Q6STE5 483 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 DEPDC4Q8N2C3 294 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 ZNF525Q8N782 197 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 OR52L1Q8NGH7 329 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 NANOS1Q8WY41 292 aaKnown RBP11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 CIB1Q99828 191 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 KATNB1Q9BVA0 655 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 BARX1Q9HBU1 254 aaPredicted RBP11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 INIPQ9NRY2 104 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 B3GNT2Q9NY97 397 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 TAS2R5Q9NYW4 299 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 ORC6Q9Y5N6 252 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 SVEP1Q4LDE5 3571 aa11.01□□□□□ -0.65
SEC61A1-206ENST00000491668 YLPM1P49750 1951 aaKnown RBP11□□□□□ -0.65
SEC61A1-206ENST00000491668 ZNF726A6NNF4 738 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 H3BN98 237 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 AKAP8O43823 692 aaKnown RBP11□□□□□ -0.65
SEC61A1-206ENST00000491668 NDUFB2O95178 105 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 HOXB1P14653 301 aaPredicted RBP11□□□□□ -0.65
SEC61A1-206ENST00000491668 CBR1P16152 277 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 GSSP48637 474 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 UBE2NP61088 152 aaKnown RBP11□□□□□ -0.65
SEC61A1-206ENST00000491668 RPL18Q07020 188 aaKnown RBP11□□□□□ -0.65
SEC61A1-206ENST00000491668 ZP4Q12836 540 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 COX10Q12887 443 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 CAMK2DQ13557 499 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 TRIP10Q15642 601 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 ADIPOQQ15848 244 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 C3orf36Q3SXR2 165 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 ZNF770Q6IQ21 691 aaPredicted RBP11□□□□□ -0.65
SEC61A1-206ENST00000491668 RPL13AP3Q6NVV1 102 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 ZNF627Q7L945 461 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 PXKQ7Z7A4 578 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 GPR137CQ8N3F9 429 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 MOSPD2Q8NHP6 518 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 DNAJC9Q8WXX5 260 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 ADAD1Q96M93 576 aaKnown RBP11□□□□□ -0.65
SEC61A1-206ENST00000491668 ZNF75AQ96N20 296 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 GPA33Q99795 319 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 C9orf16Q9BUW7 83 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 DGCR6LQ9BY27 220 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 PAPOLBQ9NRJ5 636 aaKnown RBP11□□□□□ -0.65
SEC61A1-206ENST00000491668 CA10Q9NS85 328 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 KRT84Q9NSB2 600 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 ZNF224Q9NZL3 707 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 STX18Q9P2W9 335 aaKnown RBP11□□□□□ -0.65
SEC61A1-206ENST00000491668 HIF3AQ9Y2N7 669 aa11□□□□□ -0.65
SEC61A1-206ENST00000491668 RTTNQ86VV8 2226 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 KIAA1324LA8MWY0 1029 aaPredicted RBP10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 ZNF99A8MXY4 864 aaPredicted RBP10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 SOX14O95416 240 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 BCL10O95999 233 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 HLA-HP01893 362 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 IGFBP1P08833 259 aaPredicted RBP10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 IFNGR1P15260 489 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 POU1F1P28069 291 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 SLC6A6P31641 620 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 SERPINF1P36955 418 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 DAP3P51398 398 aaKnown RBP10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 IDH3GP51553 393 aaPredicted RBP10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 NUDT6P53370 316 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 CTXN1P60606 82 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 TOP3AQ13472 1001 aaPredicted RBP10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 RAB35Q15286 201 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 ZBTB49Q6ZSB9 765 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 RASSF6Q6ZTQ3 369 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 SLC35D2Q76EJ3 337 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 HDDC2Q7Z4H3 204 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 MDP1Q86V88 176 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 IGFN1Q86VF2 1251 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 TEX47Q8TBZ9 253 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 FBXO17Q96EF6 278 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 LRR1Q96L50 414 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 NIPSNAP1Q9BPW8 284 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 RBM4BQ9BQ04 359 aaKnown RBP10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 RBM4Q9BWF3 364 aaKnown RBP10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 OSBPL10Q9BXB5 764 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 OR52D1Q9H346 318 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 SMURF2Q9HAU4 748 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 TBC1D23Q9NUY8 699 aa10.99□□□□□ -0.65
SEC61A1-206ENST00000491668 IL20RAQ9UHF4 553 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms