RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SLC6A9P48067 706 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 POLR2JP52435 117 aaKnown RBP11.13□□□□□ -0.63
USF1-206ENST00000491629 RGS8P57771 180 aaPredicted RBP11.13□□□□□ -0.63
USF1-206ENST00000491629 KRTAP10-3P60369 221 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 PAX2Q02962 417 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 NPTX1Q15818 432 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 ZNF74Q16587 644 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 PABPC1L2AQ5JQF8 200 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 RFPL4BQ6ZWI9 263 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 RHOUQ7L0Q8 258 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 RBM15BQ8NDT2 890 aaKnown RBP11.13□□□□□ -0.63
USF1-206ENST00000491629 SLC25A40Q8TBP6 338 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 KLF14Q8TD94 323 aaPredicted RBP11.13□□□□□ -0.63
USF1-206ENST00000491629 ST7LQ8TDW4 575 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 MCHR2Q969V1 340 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 ZNF566Q969W8 418 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 SLC25A28Q96A46 364 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 TMIGD2Q96BF3 282 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 ZBTB9Q96C00 473 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 POM121L2Q96KW2 1035 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 OR52B2Q96RD2 323 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 SEPHS2Q99611 448 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 MRPL13Q9BYD1 178 aaKnown RBP11.13□□□□□ -0.63
USF1-206ENST00000491629 OR2J1Q9GZK6 312 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 C1orf198Q9H425 327 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 PATZ1Q9HBE1 687 aaKnown RBP11.13□□□□□ -0.63
USF1-206ENST00000491629 TMEM27Q9HBJ8 222 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 MSL2Q9HCI7 577 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 SSU72Q9NP77 194 aaKnown RBP11.13□□□□□ -0.63
USF1-206ENST00000491629 MMP24Q9Y5R2 645 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 NPTNQ9Y639 398 aa11.13□□□□□ -0.63
USF1-206ENST00000491629 IGKV1D-43A0A0B4J1Z2 117 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 A8MXK9 166 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 C5orf58C9J3I9 102 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 SNNO75324 88 aaPredicted RBP11.12□□□□□ -0.63
USF1-206ENST00000491629 FARS2O95363 451 aaKnown RBP11.12□□□□□ -0.63
USF1-206ENST00000491629 GPANK1O95872 356 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 CH25HO95992 272 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 MT-ATP6P00846 226 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 NGFP01138 241 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 CD55P08174 381 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 SBK2P0C263 348 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 ASAH2BP0C7U1 165 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 KITP10721 976 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 ZNF133P52736 654 aaPredicted RBP11.12□□□□□ -0.63
USF1-206ENST00000491629 GYS2P54840 703 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 CDK6Q00534 326 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 PAX8Q06710 450 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 C11orf91Q3C1V1 193 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 ZNF718Q3SXZ3 478 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 SLC36A2Q495M3 483 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 MBNL2Q5VZF2 373 aaKnown RBP11.12□□□□□ -0.63
USF1-206ENST00000491629 REEP3Q6NUK4 255 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 OR1J2Q8NGS2 313 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
USF1-206ENST00000491629 WFDC12Q8WWY7 111 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 NABP1Q96AH0 204 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 DACT3Q96B18 629 aaPredicted RBP11.12□□□□□ -0.63
USF1-206ENST00000491629 SIGLEC11Q96RL6 698 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 DCLRE1CQ96SD1 692 aaKnown RBP11.12□□□□□ -0.63
USF1-206ENST00000491629 RMND5AQ9H871 391 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 UGT2A1Q9Y4X1 527 aa11.12□□□□□ -0.63
USF1-206ENST00000491629 TRBV5-3A0A0A0MS03 114 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 IQCMA0A1B0GVH7 501 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 M0R3H8 397 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 RNF13O43567 381 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 PLATP00750 562 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 ZNF32P17041 273 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 CCNOP22674 350 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 STOMP27105 288 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 CDAP32320 146 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 APLNRP35414 380 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 WDR4P57081 412 aaKnown RBP11.11□□□□□ -0.63
USF1-206ENST00000491629 RELBQ01201 579 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 ZMYND11Q15326 602 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 MOGQ16653 247 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 NRN1LQ496H8 165 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 TNFAIP8L3Q5GJ75 292 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 LRIF1Q5T3J3 769 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 GCNT6Q5T4J0 391 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 HHATQ5VTY9 493 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 NXNQ6DKJ4 435 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 Q6ZR03 302 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 DPPA2Q7Z7J5 298 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 LRRC28Q86X40 367 aaPredicted RBP11.11□□□□□ -0.63
USF1-206ENST00000491629 TREML1Q86YW5 311 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 RBM45Q8IUH3 476 aaKnown RBP11.11□□□□□ -0.63
USF1-206ENST00000491629 KIRREL3Q8IZU9 778 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 OR4D11Q8NGI4 311 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 AKR7LQ8NHP1 331 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 NMD3Q96D46 503 aaKnown RBP11.11□□□□□ -0.63
USF1-206ENST00000491629 POFUT1Q9H488 388 aa11.11□□□□□ -0.63
USF1-206ENST00000491629 KMT2CQ8NEZ4 4911 aaKnown RBP11.1□□□□□ -0.63
USF1-206ENST00000491629 C5orf49A4QMS7 147 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 TRPC5OSA6NMA1 111 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 SLC2A10O95528 541 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 PTHP01270 115 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 MT-ND5P03915 603 aa11.1□□□□□ -0.63
USF1-206ENST00000491629 AQP1P29972 269 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms