RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MPZL1O95297 269 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 IGHG1P01857 330 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 HIST1H2ABP04908 130 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 VIMP08670 466 aaKnown RBP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 LAP3P28838 519 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 KDELR2P33947 212 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 GPR6P46095 362 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 LMO4P61968 165 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 HOXA4Q00056 320 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 PSG4Q00888 419 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 CD47Q08722 323 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 CYLC2Q14093 348 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 NKPD1Q17RQ9 610 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 RGS7BPQ6MZT1 257 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 ZNF774Q6NX45 483 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 SLC25A47Q6Q0C1 308 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 HIST3H2AQ7L7L0 130 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 NRMQ8IXM6 262 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 FAM86B1Q8N7N1 296 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 LINC01356Q8N9X3 169 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 BHLHE22Q8NFJ8 381 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 OR1J1Q8NGS3 322 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 IPCEF1Q8WWN9 437 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 GEMIN6Q8WXD5 167 aaKnown RBP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 SLC7A6Q92536 515 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 TAF15Q92804 592 aaKnown RBP eCLIP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 HIST1H2ACQ93077 130 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 SEPHS2Q99611 448 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 RACGAP1Q9H0H5 632 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 WNT5BQ9H1J7 359 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 METTL17Q9H7H0 456 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-211ENST00000491581 CDH20Q9HBT6 801 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.58□□□□□ -1.23e-6■■■■□ 26.4
HDAC3-211ENST00000491581 LOC105371242A0A075B767 164 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 IGHV3-64DA0A0J9YX35 117 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 A0A1W2PPL8 197 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 A0A1W2PRG6 482 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 C5orf49A4QMS7 147 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 C17orf100A8MU93 164 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 FAM220BPB1ANY3 271 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 OR5F1O95221 314 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF682O95780 498 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 TSPAN19P0C672 248 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 SAGP10523 405 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-211ENST00000491581 SLC9A3P48764 834 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 UCP2P55851 309 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 CTXN1P60606 82 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 ENDOGQ14249 297 aaKnown RBP7.58□□□□□ -1.2
HDAC3-211ENST00000491581 ALG10Q5BKT4 473 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 USP51Q70EK9 711 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 SLC15A3Q8IY34 581 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 RNF148Q8N7C7 305 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 FAM156AQ8NDB6 213 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 IL17RDQ8NFM7 739 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 OR2T12Q8NG77 320 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 OR8J3Q8NGG0 315 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 SYNPRQ8TBG9 265 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 SLC25A40Q8TBP6 338 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 C22orf15Q8WYQ4 148 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 RDH5Q92781 318 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 BPIFA2Q96DR5 249 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 MPP4Q96JB8 637 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 POM121L2Q96KW2 1035 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 LRRC37BQ96QE4 947 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 OR2J1Q9GZK6 312 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 VIPAS39Q9H9C1 493 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 MSL2Q9HCI7 577 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 MYOZ1Q9NP98 299 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-211ENST00000491581 HINT3Q9NQE9 182 aaKnown RBP7.58□□□□□ -1.2
HDAC3-211ENST00000491581 HIF1ANQ9NWT6 349 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 LPAR3Q9UBY5 353 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 SLC7A8Q9UHI5 535 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 PRDM4Q9UKN5 801 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 MED31Q9Y3C7 131 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 SOX21Q9Y651 276 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-211ENST00000491581 V9GYQ6 96 aa7.58□□□□□ -1.2
HDAC3-211ENST00000491581 ATRQ13535 2644 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 DYSFO75923 2080 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 IGLV3-9A0A075B6K5 115 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 A0A087WUU8 490 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ELOVL7A1L3X0 281 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 PRSS23O95084 383 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 IGHV1-46P01743 117 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 GAAP10253 952 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF250P15622 560 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ACHEP22303 614 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ANOS1P23352 680 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 STOMP27105 288 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 MSX2P35548 267 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 SRP14P37108 136 aaKnown RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF84P51523 738 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 SLC7A2P52569 658 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 ZNF133P52736 654 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 KLF3P57682 345 aaPredicted RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 FXYD6P3P58550 94 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 SEC61A1P61619 476 aaKnown RBP7.57□□□□□ -1.2
HDAC3-211ENST00000491581 HSF2Q03933 536 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 LIPEQ05469 1076 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 TBC1D28Q2M2D7 210 aa7.57□□□□□ -1.2
HDAC3-211ENST00000491581 SLC36A2Q495M3 483 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms