RNA–Protein interactions for RNA: ENST00000491086.5

RNF13-215, Transcript of ring finger protein 13, human

TSL 2

Gene RNF13, Length 1,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF13-215	ENST00000491086	CLEC2D	Q9UHP7	191 aa		11.44	□□□□□ -0.58
RNF13-215	ENST00000491086	CLEC4A	Q9UMR7	237 aa		11.44	□□□□□ -0.58
RNF13-215	ENST00000491086	COA3	Q9Y2R0	106 aa	Predicted RBP	11.44	□□□□□ -0.58
RNF13-215	ENST00000491086	LSM2	Q9Y333	95 aa	Known RBP	11.44	□□□□□ -0.58
RNF13-215	ENST00000491086	TRGV8	A0A0C4DH27	118 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	MBD3L3	A6NE82	208 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	ZNF726	A6NNF4	738 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	SELENOF	O60613	162 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	SS18L1	O75177	396 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	KHDRBS3	O75525	346 aa	Known RBP	11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	UPK3A	O75631	287 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	TOX	O94900	526 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	MPZL1	O95297	269 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	RAB36	O95755	333 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	QDPR	P09417	244 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	ATP6V1B1	P15313	513 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	EEF1B2	P24534	225 aa	Known RBP	11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	DCK	P27707	260 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	AGTR1	P30556	359 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	CD79B	P40259	229 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	MAP2K4	P45985	399 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	CSNK1A1	P48729	337 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	HCCS	P53701	268 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	CLRN1	P58418	232 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	ZNF85	Q03923	595 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	TBCE	Q15813	527 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	KCNMB1	Q16558	191 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	CARD17	Q5XLA6	110 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	CHMP1B	Q7LBR1	199 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	FJX1	Q86VR8	437 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	RFLNB	Q8N5W9	214 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	POMGNT2	Q8NAT1	580 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	PROKR2	Q8NFJ6	384 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	FNDC8	Q8TC99	324 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	RBP7	Q96R05	134 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	TRIB1	Q96RU8	372 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	LINC00470	Q9BZP3	86 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	WDR76	Q9H967	626 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	ACOT13	Q9NPJ3	140 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	TINAG	Q9UJW2	476 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	COPS3	Q9UNS2	423 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	COMMD3-BMI1	R4GMX3	469 aa		11.43	□□□□□ -0.58
RNF13-215	ENST00000491086	IRGM	A1A4Y4	181 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	TVP23A	A6NH52	213 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	PRR32	B1ATL7	298 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	RPL36A-HNRNPH2	H7BZ11	118 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	LRRTM2	O43300	516 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	AKAP8	O43823	692 aa	Known RBP	11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	WDR1	O75083	606 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	CLPTM1	O96005	669 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	PTH	P01270	115 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	HRG	P04196	525 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	MRPL3	P09001	348 aa	Known RBP	11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	FCGR2A	P12318	317 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	CENPA	P49450	140 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	RPS7	P62081	194 aa	Known RBP	11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	HSF2	Q03933	536 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	POU4F2	Q12837	409 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	TEX30	Q5JUR7	227 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	ZNF684	Q5T5D7	378 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	RIPPLY2	Q5TAB7	128 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	TSPO2	Q5TGU0	170 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	LCN1P1	Q5VSP4	162 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	UBE2U	Q5VVX9	321 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	OTP	Q5XKR4	325 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	ZNF585A	Q6P3V2	769 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	RPTN	Q6XPR3	784 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	KCTD8	Q6ZWB6	473 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	SSX6	Q7RTT6	188 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	SLC16A9	Q7RTY1	509 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	CD163	Q86VB7	1156 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	CDC20B	Q86Y33	519 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	DOLPP1	Q86YN1	238 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	STX19	Q8N4C7	294 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	RPRML	Q8N4K4	120 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	NANOGP1	Q8N7R0	232 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	OR6K6	Q8NGW6	343 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	NABP1	Q96AH0	204 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	FOXN4	Q96NZ1	517 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	PRRG4	Q9BZD6	226 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	GLRX2	Q9NS18	164 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	ERVK13-1	Q9NX77	482 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	EMC3	Q9P0I2	261 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	SCOC	Q9UIL1	159 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	KLHDC2	Q9Y2U9	406 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	NOSIP	Q9Y314	301 aa	Known RBP	11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	DOPEY1	Q5JWR5	2465 aa		11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	SETX	Q7Z333	2677 aa	Known RBP	11.42	□□□□□ -0.58
RNF13-215	ENST00000491086	ASH1L	Q9NR48	2969 aa	Known RBP	11.41	□□□□□ -0.58
RNF13-215	ENST00000491086	TMEM129	A0AVI4	362 aa		11.41	□□□□□ -0.58
RNF13-215	ENST00000491086	C12orf71	A8MTZ7	269 aa		11.41	□□□□□ -0.58
RNF13-215	ENST00000491086	DHH	O43323	396 aa		11.41	□□□□□ -0.58
RNF13-215	ENST00000491086	SLC43A1	O75387	559 aa		11.41	□□□□□ -0.58
RNF13-215	ENST00000491086	FADS2	O95864	444 aa	Known RBP	11.41	□□□□□ -0.58
RNF13-215	ENST00000491086	LCK	P06239	509 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms