RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SLC36A2Q495M3 483 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 RUNDC3AQ59EK9 446 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 ZMAT1Q5H9K5 638 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 MTX3Q5HYI7 312 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 C6orf136Q5SQH8 315 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 C1orf122Q6ZSJ8 110 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 RFPL4BQ6ZWI9 263 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 SLC16A14Q7RTX9 510 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 PDZD9Q8IXQ8 264 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 PEX5LQ8IYB4 626 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 GALNT4Q8N4A0 578 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 SCCPDHQ8NBX0 429 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 ADPRHL1Q8NDY3 354 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 OR8B3Q8NGG8 313 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 LHX4Q969G2 390 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 TMEM54Q969K7 222 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 OR8B2Q96RD0 313 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 VPREB3Q9UKI3 123 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 SACSQ9NZJ4 4579 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 ENSAO43768 121 aaKnown RBP11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 TIMM8AO60220 97 aaPredicted RBP11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 PROCP04070 461 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 TNFSF4P23510 183 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 CPT2P23786 658 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 STOMP27105 288 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 MMP16P51512 607 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 EFNB2P52799 333 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 BIDP55957 195 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 KRTAP10-11P60412 298 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 HSF2Q03933 536 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 PABPC1L2AQ5JQF8 200 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 ZBTB37Q5TC79 503 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 PGBD2Q6P3X8 592 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 LRFN4Q6PJG9 635 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 Q6ZR03 302 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 KLHDC1Q8N7A1 406 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 FNDC5Q8NAU1 212 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 OR52P1PQ8NH57 321 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 ZNF420Q8TAQ5 688 aaPredicted RBP11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 SLC38A4Q969I6 547 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 R3HDM4Q96D70 268 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 SLC41A3Q96GZ6 507 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 C3orf30Q96M34 536 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 SLC35A5Q9BS91 424 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 SEMA6AQ9H2E6 1030 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 A4GALTQ9NPC4 353 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 GLTPQ9NZD2 209 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 KLHL14Q9P2G3 628 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 EIF3KQ9UBQ5 218 aaKnown RBP11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 CLN8Q9UBY8 286 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 PRDM4Q9UKN5 801 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 CHST2Q9Y4C5 530 aa11.31□□□□□ -0.6
EXOSC3-207ENST00000490516 IGKV1D-42A0A075B6H8 117 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 TRAV36DV7A0A075B6V5 113 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 LOC100509620A0A075B734 347 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 EXOC1LA0A1B0GW35 172 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 C5orf49A4QMS7 147 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 ANKRD61A6NGH8 418 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 ZNF879B4DU55 563 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 ENTPD5O75356 428 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 CYB5R3P00387 301 aaPredicted RBP11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 MMP7P09237 267 aaPredicted RBP11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 NR2F1P10589 423 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 G6PDP11413 515 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 MSX2P35548 267 aaPredicted RBP11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 PPP1CBP62140 327 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 MAPK11Q15759 364 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 LIN52Q52LA3 116 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 WDR25Q64LD2 544 aaPredicted RBP11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 LYPD2Q6UXB3 125 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 VASH1Q7L8A9 365 aaPredicted RBP11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 NET1Q7Z628 596 aaPredicted RBP11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 DPPA2Q7Z7J5 298 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 LRRC18Q8N456 261 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 PIP4P2Q8N4L2 257 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 HIPK4Q8NE63 616 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 ABHD4Q8TB40 342 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 C10orf82Q8WW14 230 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 WDFY2Q96P53 400 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 RHOXF2Q9BQY4 288 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 PPA2Q9H2U2 334 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 GCM1Q9NP62 436 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 ZNF443Q9Y2A4 671 aaPredicted RBP11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 U3KQK5 164 aa11.3□□□□□ -0.6
EXOSC3-207ENST00000490516 BTBD17A6NE02 478 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 AHCYP23526 432 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 SLC6A2P23975 617 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 GNG11P61952 73 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 PUDPQ08623 228 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 COX10Q12887 443 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 PSG7Q13046 419 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 ZNF404Q494X3 552 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 FAM201AQ5SY85 155 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 NLRC3Q7RTR2 1065 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 PPP1R35Q8TAP8 253 aa11.29□□□□□ -0.6
EXOSC3-207ENST00000490516 OR2V2Q96R30 315 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms