RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 INIPQ9NRY2 104 aa15.17■□□□□ 0.02
YIPF3-208ENST00000490447 LOC105371242A0A075B767 164 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 PLSCR5A0PG75 271 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 HMGB1P1B2RPK0 211 aaPredicted RBP15.16■□□□□ 0.02
YIPF3-208ENST00000490447 NR2C1P13056 603 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 ACADSP16219 412 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 HILS1P60008 231 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 USP43Q70EL4 1123 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 TSPYL5Q86VY4 417 aaPredicted RBP15.16■□□□□ 0.02
YIPF3-208ENST00000490447 ASB10Q8WXI3 467 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 RAB1CQ92928 201 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 GCDHQ92947 438 aaPredicted RBP15.16■□□□□ 0.02
YIPF3-208ENST00000490447 ZMYND19Q96E35 227 aaPredicted RBP15.16■□□□□ 0.02
YIPF3-208ENST00000490447 ELMOD3Q96FG2 381 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 THOC1Q96FV9 657 aaKnown RBP15.16■□□□□ 0.02
YIPF3-208ENST00000490447 ATP6V1G3Q96LB4 118 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 PLA2G12AQ9BZM1 189 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 NANOGQ9H9S0 305 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 SIAEQ9HAT2 523 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 G6PC2Q9NQR9 355 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 EIF3KQ9UBQ5 218 aaKnown RBP15.16■□□□□ 0.02
YIPF3-208ENST00000490447 SH3GLB1Q9Y371 365 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 WIPI2Q9Y4P8 454 aa15.16■□□□□ 0.02
YIPF3-208ENST00000490447 PLPP2O43688 288 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 TRMUO75648 421 aaKnown RBP15.15■□□□□ 0.02
YIPF3-208ENST00000490447 OR7A10O76100 309 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 IGHV3-13P01766 116 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 FUT1P19526 365 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 STOMP27105 288 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 RBM34P42696 430 aaKnown RBP15.15■□□□□ 0.02
YIPF3-208ENST00000490447 ZNF81P51508 661 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 UGT2B15P54855 530 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 CD47Q08722 323 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 VMACQ2NL98 169 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 ZNF718Q3SXZ3 478 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 PABPC1L2AQ5JQF8 200 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 FAM209AQ5JX71 171 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 C10orf128Q5T292 105 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 DCAF12L2Q5VW00 463 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 RETREG3Q86VR2 466 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 C3orf56Q8N813 242 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 CPEB3Q8NE35 698 aaKnown RBP15.15■□□□□ 0.02
YIPF3-208ENST00000490447 PFN4Q8NHR9 129 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 TSPEARQ8WU66 669 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 STON2Q8WXE9 905 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 SGTBQ96EQ0 304 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 PRSS27Q9BQR3 290 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 RBM4Q9BWF3 364 aaKnown RBP15.15■□□□□ 0.02
YIPF3-208ENST00000490447 SUCNR1Q9BXA5 334 aa15.15■□□□□ 0.02
YIPF3-208ENST00000490447 MRPL13Q9BYD1 178 aaKnown RBP15.15■□□□□ 0.02
YIPF3-208ENST00000490447 GMNCA6NCL1 334 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 J3QLI3 93 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 SLC2A10O95528 541 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 MMP7P09237 267 aaPredicted RBP15.14■□□□□ 0.01
YIPF3-208ENST00000490447 AQP2P41181 271 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 MRPS34P82930 218 aaKnown RBP15.14■□□□□ 0.01
YIPF3-208ENST00000490447 SPATA46Q5T0L3 261 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 PEG10Q86TG7 708 aaKnown RBP15.14■□□□□ 0.01
YIPF3-208ENST00000490447 TREML1Q86YW5 311 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 FAM216AQ8WUB2 273 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 TMEM255BQ8WV15 326 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 TMEM239Q8WW34 195 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 CCL17Q92583 94 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 GTF3AQ92664 365 aaKnown RBP15.14■□□□□ 0.01
YIPF3-208ENST00000490447 SEPHS2Q99611 448 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 GAL3ST1Q99999 423 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 POLR2J2Q9GZM3 115 aaKnown RBP15.14■□□□□ 0.01
YIPF3-208ENST00000490447 POLR2J3Q9H1A7 115 aaKnown RBP15.14■□□□□ 0.01
YIPF3-208ENST00000490447 SMURF2Q9HAU4 748 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 INTS9Q9NV88 658 aaKnown RBP15.14■□□□□ 0.01
YIPF3-208ENST00000490447 BAG5Q9UL15 447 aa15.14■□□□□ 0.01
YIPF3-208ENST00000490447 ISPDA4D126 451 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 C5orf49A4QMS7 147 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 SPRY3O43610 288 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 OR5F1O95221 314 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 IGF2P01344 180 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 IGHV2-5P01817 119 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 ZNF32P17041 273 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 GATA3P23771 443 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 CDAP32320 146 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 GUCA1AP43080 201 aaPredicted RBP15.13■□□□□ 0.01
YIPF3-208ENST00000490447 LIMS1P48059 325 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 COMPP49747 757 aaPredicted RBP15.13■□□□□ 0.01
YIPF3-208ENST00000490447 GDI2P50395 445 aaKnown RBP15.13■□□□□ 0.01
YIPF3-208ENST00000490447 SLC3A1Q07837 685 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 CYLC2Q14093 348 aaPredicted RBP15.13■□□□□ 0.01
YIPF3-208ENST00000490447 SGCAQ16586 387 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 C1orf229Q6ZS94 237 aaPredicted RBP15.13■□□□□ 0.01
YIPF3-208ENST00000490447 CCDC80Q76M96 950 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 C1QL2Q7Z5L3 287 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 NKAIN4Q8IVV8 208 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 NANPQ8TBE9 248 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 NSMAFQ92636 917 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 SH3GL1Q99961 368 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 TMPRSS13Q9BYE2 586 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 EGLN1Q9GZT9 426 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 CACNG2Q9Y698 323 aa15.13■□□□□ 0.01
YIPF3-208ENST00000490447 TENM1Q9UKZ4 2725 aa15.12■□□□□ 0.01
YIPF3-208ENST00000490447 SPRY1O43609 319 aaPredicted RBP15.12■□□□□ 0.01
YIPF3-208ENST00000490447 DEAF1O75398 565 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms