RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PPM1AP35813 382 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SERPINF1P36955 418 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 LPAR6P43657 344 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 RABIFP47224 123 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 DHPSP49366 369 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 GPR15P49685 360 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SULT1A2P50226 295 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 LBX1P52954 281 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 UCP2P55851 309 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SOX8P57073 446 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST1H2BDP58876 126 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST1H2BCP62807 126 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 NKX6-1P78426 367 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CYCSP99999 105 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 IRF8Q02556 426 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TUSC3Q13454 348 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ATXN7L3Q14CW9 347 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR7A5Q15622 319 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST2H2BEQ16778 126 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 DEFB115Q30KQ5 88 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 C14orf28Q4W4Y0 310 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 XKR4Q5GH76 650 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CLEC12AQ5QGZ9 265 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 GGNBP1Q5YKI7 109 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 MED27Q6P2C8 311 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 FRRS1Q6ZNA5 592 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TAF8Q7Z7C8 310 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SCN4BQ8IWT1 228 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM86AQ8N2M4 240 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 RNF175Q8N4F7 328 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR10H4Q8NGA5 316 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR4K14Q8NGD5 310 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR2A12Q8NGT7 310 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC2A12Q8TD20 617 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 NEK7Q8TDX7 302 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SECTM1Q8WVN6 248 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ASB17Q8WXJ9 295 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST1H2BHQ93079 126 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ZBTB8AQ96BR9 441 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 FOXRED1Q96CU9 486 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 NTNG2Q96CW9 530 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 NEURL3Q96EH8 262 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 RRNAD1Q96FB5 475 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM19Q96HH6 336 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 PCED1BQ96HM7 432 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SEC22AQ96IW7 307 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 MRGPRX4Q96LA9 322 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 DERL3Q96Q80 235 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST1H2BNQ99877 126 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HIST1H2BMQ99879 126 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC12A9Q9BXP2 914 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SELENOIQ9C0D9 397 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SPACA1Q9HBV2 294 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 BPIFA1Q9NP55 256 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HINT3Q9NQE9 182 aaKnown RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 PRDM6Q9NQX0 595 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SPHK2Q9NRA0 654 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CUTCQ9NTM9 273 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM30AQ9NV96 361 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR14J1Q9UGF5 321 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR5V1Q9UGF6 321 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ST6GALNAC2Q9UJ37 374 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 GJD2Q9UKL4 321 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ICKQ9UPZ9 632 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 STARD10Q9Y365 291 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 FBXO7Q9Y3I1 522 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 V9GY05 133 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 COL4A4P53420 1690 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 A0A1W2PPK0 400 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CDRT15L2A8MXV6 281 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 TAAR5O14804 337 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC16A5O15375 505 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 INSIG1O15503 277 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR1F1O43749 312 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CDC14BO60729 498 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 PAPLNO95428 1278 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 PPP1R3DO95685 299 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 GCGP01275 180 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 BCHEP06276 602 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CKMP06732 381 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CD3EP07766 207 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 GUSBP08236 651 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 GZMBP10144 247 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 GTF2F2P13984 249 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 EDNRBP24530 442 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HOXA11P31270 313 aaPredicted RBP4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 HOXC12P31275 282 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 PYCR1P32322 319 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 AQP2P41181 271 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 PPICP45877 212 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 GPR3P46089 330 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 CDKN1BP46527 198 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 SCAND1P57086 179 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 OR12D2P58182 307 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 RBX1P62877 108 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF763Q0D2J5 394 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 MEF2DQ14814 521 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 LY6KQ17RY6 165 aa4.33□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF674Q2M3X9 581 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms