RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 TMIGD2Q96BF3 282 aa12.54□□□□□ -0.4
VPS26A-205ENST00000489656 MRPL48Q96GC5 212 aaKnown RBP12.54□□□□□ -0.4
VPS26A-205ENST00000489656 COG8Q96MW5 612 aa12.54□□□□□ -0.4
VPS26A-205ENST00000489656 ALG8Q9BVK2 526 aa12.54□□□□□ -0.4
VPS26A-205ENST00000489656 LINC00470Q9BZP3 86 aa12.54□□□□□ -0.4
VPS26A-205ENST00000489656 FAM192AQ9GZU8 254 aa12.54□□□□□ -0.4
VPS26A-205ENST00000489656 WDR76Q9H967 626 aa12.54□□□□□ -0.4
VPS26A-205ENST00000489656 GLRX2Q9NS18 164 aa12.54□□□□□ -0.4
VPS26A-205ENST00000489656 MRPL22Q9NWU5 206 aaKnown RBP12.54□□□□□ -0.4
VPS26A-205ENST00000489656 LUZP4Q9P127 313 aa12.54□□□□□ -0.4
VPS26A-205ENST00000489656 SPENQ96T58 3664 aaKnown RBP12.54□□□□□ -0.4
VPS26A-205ENST00000489656 ZZEF1O43149 2961 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 TVP23AA6NH52 213 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 ZNF670-ZNF695F2Z2N8 137 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 PHYHO14832 338 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 TGM6O95932 706 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 QDPRP09417 244 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 SFTPCP11686 197 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 LAP3P28838 519 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 PTGER4P35408 488 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 ENTPD1P49961 510 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 ACTA2P62736 377 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 ACTG2P63267 376 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 ACSM1Q08AH1 577 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 MLLT11Q13015 90 aaPredicted RBP12.53□□□□□ -0.4
VPS26A-205ENST00000489656 SPHARQ15513 63 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 MED22Q15528 200 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 TIGD6Q17RP2 521 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 CDONQ4KMG0 1287 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 TMPRSS11AQ6ZMR5 421 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 MCEMP1Q8IX19 187 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 SYS1Q8N2H4 156 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 WNT2BQ93097 391 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 OR5M11Q96RB7 305 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 SLX1AQ9BQ83 275 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 RBM38Q9H0Z9 239 aaKnown RBP12.53□□□□□ -0.4
VPS26A-205ENST00000489656 RERGLQ9H628 205 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 CALHM2Q9HA72 323 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 KCNG2Q9UJ96 466 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 NOSIPQ9Y314 301 aaKnown RBP12.53□□□□□ -0.4
VPS26A-205ENST00000489656 UGT2A1Q9Y4X1 527 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 TMEM14AQ9Y6G1 99 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
VPS26A-205ENST00000489656 A0A1W2PQL4 384 aaPredicted RBP12.52□□□□□ -0.41
VPS26A-205ENST00000489656 CD8B2A6NJW9 211 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 DHHO43323 396 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 SS18L1O75177 396 aaPredicted RBP12.52□□□□□ -0.41
VPS26A-205ENST00000489656 MRPL33O75394 65 aaKnown RBP12.52□□□□□ -0.41
VPS26A-205ENST00000489656 GPANK1O95872 356 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 HLA-DQA2P01906 255 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 GABRA1P14867 456 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 PSMB9P28065 219 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 BDH1Q02338 343 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 KLRB1Q12918 225 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 GUSBP1Q15486 140 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.41
VPS26A-205ENST00000489656 PHYHD1Q5SRE7 291 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF322Q6U7Q0 402 aaPredicted RBP12.52□□□□□ -0.41
VPS26A-205ENST00000489656 TUSC5Q8IXB3 177 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 TEX19Q8NA77 164 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 OTOSQ8NHW6 89 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 GMPPAQ96IJ6 420 aaPredicted RBP12.52□□□□□ -0.41
VPS26A-205ENST00000489656 TBX5Q99593 518 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 MGLLQ99685 303 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 SLC25A18Q9H1K4 315 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 SLCO5A1Q9H2Y9 848 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 B3GAT2Q9NPZ5 323 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 COPS3Q9UNS2 423 aa12.52□□□□□ -0.41
VPS26A-205ENST00000489656 C3orf80F5H4A9 247 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF593O00488 134 aaPredicted RBP12.51□□□□□ -0.41
VPS26A-205ENST00000489656 WDR1O75083 606 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 SCG5P05408 212 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 HOXD4P09016 255 aaPredicted RBP12.51□□□□□ -0.41
VPS26A-205ENST00000489656 ALOX5APP20292 161 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 AGTR1P30556 359 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 CD79BP40259 229 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 EGR3Q06889 387 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 DOC2BQ14184 412 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 OR2A2Q6IF42 318 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 PLXDC2Q6UX71 529 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 SSX6Q7RTT6 188 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 DPY19L4Q7Z388 723 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 P4HA3Q7Z4N8 544 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 GPR137CQ8N3F9 429 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 CISD2Q8N5K1 135 aaKnown RBP12.51□□□□□ -0.41
VPS26A-205ENST00000489656 OR6N2Q8NGY6 317 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 FAM57AQ8TBR7 257 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 CPT1CQ8TCG5 803 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 NSMAFQ92636 917 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 ZNF775Q96BV0 537 aaPredicted RBP12.51□□□□□ -0.41
VPS26A-205ENST00000489656 YIPF6Q96EC8 236 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 OPALINQ96PE5 141 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 ULBP2Q9BZM5 246 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 POLE4Q9NR33 117 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 ZMIZ1Q9ULJ6 1067 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 CEPT1Q9Y6K0 416 aa12.51□□□□□ -0.41
VPS26A-205ENST00000489656 MAP1BP46821 2468 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms