RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TUBD1Q9UJT1 453 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 FOXD3Q9UJU5 478 aaPredicted RBP19.19■□□□□ 0.66
SMC4-221ENST00000489573 TMEM14AQ9Y6G1 99 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 CCRL2O00421 344 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 ZNF593O00488 134 aaPredicted RBP19.19■□□□□ 0.66
SMC4-221ENST00000489573 HRGP04196 525 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 LAP3P28838 519 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 CAPZA2P47755 286 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 ACSM1Q08AH1 577 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 CDONQ4KMG0 1287 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 LRFN4Q6PJG9 635 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 FAM180AQ6UWF9 173 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 DPY19L4Q7Z388 723 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 SYS1Q8N2H4 156 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 RAB2BQ8WUD1 216 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 SNX33Q8WV41 574 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 LAMP5Q9UJQ1 280 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 KLHDC2Q9Y2U9 406 aa19.19■□□□□ 0.66
SMC4-221ENST00000489573 A0A1B0GTH9 108 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 A0A1W2PPL8 197 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 OR14I1A6ND48 311 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 SLC22A20A6NK97 555 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 ZNF724A8MTY0 619 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 PHYHO14832 338 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 MPZL1O95297 269 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 SPARCP09486 303 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 FCGR2AP12318 317 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 ZNF823P16415 610 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 NTF4P34130 210 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 SSX1Q16384 188 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 MEP1BQ16820 701 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 PHYHD1Q5SRE7 291 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 C10orf128Q5T292 105 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 OTPQ5XKR4 325 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 SLC16A12Q6ZSM3 486 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 KLBQ86Z14 1044 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 MCEMP1Q8IX19 187 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 OTOSQ8NHW6 89 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 GPR137Q96N19 417 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 DOK1Q99704 481 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 ULBP2Q9BZM5 246 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 BCO1Q9HAY6 547 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 BABAM2Q9NXR7 383 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 ZMIZ1Q9ULJ6 1067 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 NOSIPQ9Y314 301 aaKnown RBP19.18■□□□□ 0.66
SMC4-221ENST00000489573 CFAP47Q6ZTR5 3102 aa19.18■□□□□ 0.66
SMC4-221ENST00000489573 J3QLW9 94 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 GABARAPO95166 117 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 LALBAP00709 142 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 PSKH1P11801 424 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 CPEP16870 476 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 ZNF19P17023 458 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 ALOX5APP20292 161 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 RPS27P42677 84 aaKnown RBP19.17■□□□□ 0.66
SMC4-221ENST00000489573 OR12D2P58182 307 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 BDH1Q02338 343 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 ST3GAL2Q16842 350 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 TP53I3Q53FA7 332 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 OR10H5Q8NGA6 315 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 C11orf40Q8WZ69 217 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 UFD1Q92890 307 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 TRIM36Q9NQ86 728 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 KCNG2Q9UJ96 466 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 DNAJC13O75165 2243 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 LOC400499M0QZD8 3231 aa19.17■□□□□ 0.66
SMC4-221ENST00000489573 PTPRQQ9UMZ3 2332 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 TMEM8BA6NDV4 472 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 TPBGQ13641 420 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 TEX30Q5JUR7 227 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 VASH1Q7L8A9 365 aaPredicted RBP19.16■□□□□ 0.66
SMC4-221ENST00000489573 ADGRE4PQ86SQ3 457 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 TUSC5Q8IXB3 177 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 ZNF454Q8N9F8 522 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 C12orf43Q96C57 262 aaKnown RBP19.16■□□□□ 0.66
SMC4-221ENST00000489573 BCL7BQ9BQE9 202 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 B3GAT2Q9NPZ5 323 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 UGT2A1Q9Y4X1 527 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 USP24Q9UPU5 2620 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 ZZEF1O43149 2961 aa19.16■□□□□ 0.66
SMC4-221ENST00000489573 H3BMQ9 156 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 DHHO43323 396 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 TGM6O95932 706 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 CNPY1Q3B7I2 92 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 LIPKQ5VXJ0 399 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 SLC18B1Q6NT16 456 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 PHC2Q8IXK0 858 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 GPR137CQ8N3F9 429 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 THEM6Q8WUY1 208 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 ASB17Q8WXJ9 295 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 SEC61A2Q9H9S3 476 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 PARPBPQ9NWS1 579 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 NDUFB11Q9NX14 153 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 CLCF1Q9UBD9 225 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 GNG8Q9UK08 70 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 PRR32B1ATL7 298 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 MAGEB4O15481 346 aaPredicted RBP19.15■□□□□ 0.66
SMC4-221ENST00000489573 MRPL33O75394 65 aaKnown RBP19.15■□□□□ 0.66
SMC4-221ENST00000489573 UPK3AO75631 287 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 YES1P07947 543 aa19.15■□□□□ 0.66
SMC4-221ENST00000489573 GADD45AP24522 165 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms