RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 PDGFAP04085 211 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 HRGP04196 525 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 CPN1P15169 458 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 RPS27P42677 84 aaKnown RBP23.8■■□□□ 1.4
HOXB3-210ENST00000489475 GBX2P52951 348 aaPredicted RBP23.8■■□□□ 1.4
HOXB3-210ENST00000489475 GPR50Q13585 617 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 MEP1BQ16820 701 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 OTPQ5XKR4 325 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 SLC25A47Q6Q0C1 308 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 Q6ZS92 163 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 KCTD20Q7Z5Y7 419 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 ABHD3Q8WU67 409 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 ZNF775Q96BV0 537 aaPredicted RBP23.8■■□□□ 1.4
HOXB3-210ENST00000489475 INTS12Q96CB8 462 aaKnown RBP23.8■■□□□ 1.4
HOXB3-210ENST00000489475 KCNG2Q9UJ96 466 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 GAAP10253 952 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 LAP3P28838 519 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 GABRA5P31644 462 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 SLC18B1Q6NT16 456 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 GDPGP1Q6ZNW5 385 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 EGFL6Q8IUX8 553 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 TMEM54Q969K7 222 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 TMEM203Q969S6 136 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 PELI1Q96FA3 418 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 PRRG4Q9BZD6 226 aa23.8■■□□□ 1.4
HOXB3-210ENST00000489475 EXOSC4Q9NPD3 245 aaKnown RBP23.8■■□□□ 1.4
HOXB3-210ENST00000489475 A0A1W2PPL8 197 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 E9PI62 339 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 ADRB1P08588 477 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 TACSTD2P09758 323 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 CRYBB2P43320 205 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 SELENOPP49908 381 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 UCNP55089 124 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 C3AR1Q16581 482 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 LRFN4Q6PJG9 635 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 FAM220AQ7Z4H9 259 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 ZNF454Q8N9F8 522 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 NDNFQ8TB73 568 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 ASB17Q8WXJ9 295 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 WDYHV1Q96HA8 205 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 CENPOQ9BU64 300 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 ING1Q9UK53 422 aaPredicted RBP23.79■■□□□ 1.4
HOXB3-210ENST00000489475 SSR3Q9UNL2 185 aa23.79■■□□□ 1.4
HOXB3-210ENST00000489475 GPX5O75715 221 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 KRT8P05787 483 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 ZNF182P17025 639 aaPredicted RBP23.78■■□□□ 1.4
HOXB3-210ENST00000489475 TMPRSS3P57727 454 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 EGR3Q06889 387 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 ZNF684Q5T5D7 378 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 OR10H5Q8NGA6 315 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 RNF128Q8TEB7 428 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 TTYH2Q9BSA4 534 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 ACOXLQ9NUZ1 547 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 IKZF2Q9UKS7 526 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 CAMK2AQ9UQM7 478 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 SF3B6Q9Y3B4 125 aaKnown RBP23.78■■□□□ 1.4
HOXB3-210ENST00000489475 DMXL2Q8TDJ6 3036 aa23.78■■□□□ 1.4
HOXB3-210ENST00000489475 PSMD9O00233 223 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 GPR171O14626 319 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 PSKH1P11801 424 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 RPS25P62851 125 aaKnown RBP23.77■■□□□ 1.4
HOXB3-210ENST00000489475 TBR1Q16650 682 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 SOWAHCQ53LP3 525 aaPredicted RBP23.77■■□□□ 1.4
HOXB3-210ENST00000489475 TEX30Q5JUR7 227 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 AAED1Q7RTV5 226 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 SEC61A2Q9H9S3 476 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 RAXQ9Y2V3 346 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 SIRT4Q9Y6E7 314 aaPredicted RBP23.77■■□□□ 1.4
HOXB3-210ENST00000489475 METTL15A6NJ78 407 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 PRR32B1ATL7 298 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 TMCC2O75069 709 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 SLC43A1O75387 559 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 SULT1C4O75897 302 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 SIRPAP78324 504 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 RBMXL3Q8N7X1 1067 aaKnown RBP23.77■■□□□ 1.4
HOXB3-210ENST00000489475 FNDC9Q8TBE3 224 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 C11orf40Q8WZ69 217 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 TM9SF2Q99805 663 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 CDADC1Q9BWV3 514 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 EMC3Q9P0I2 261 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 FOXD3Q9UJU5 478 aaPredicted RBP23.77■■□□□ 1.4
HOXB3-210ENST00000489475 B3GNT3Q9Y2A9 372 aa23.77■■□□□ 1.4
HOXB3-210ENST00000489475 IGKV3D-15A0A087WSY6 115 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 K7EM74 188 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 AQP8O94778 261 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 EIF2B1Q14232 305 aaKnown RBP23.76■■□□□ 1.39
HOXB3-210ENST00000489475 ARL9Q6T311 187 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 RPTNQ6XPR3 784 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 USP43Q70EL4 1123 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 C20orf196Q8IYI0 205 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 YIPF7Q8N8F6 280 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 KBTBD8Q8NFY9 601 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 ABHD17AQ96GS6 310 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 TAAR6Q96RI8 345 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 TMED9Q9BVK6 235 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 MRM2Q9UI43 246 aaKnown RBP23.76■■□□□ 1.39
HOXB3-210ENST00000489475 GRIP1Q9Y3R0 1128 aa23.76■■□□□ 1.39
HOXB3-210ENST00000489475 PLPP2O43688 288 aa23.75■■□□□ 1.39
HOXB3-210ENST00000489475 OR8G3PP0DMU2 310 aa23.75■■□□□ 1.39
HOXB3-210ENST00000489475 TGFBR1P36897 503 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms