RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CLPTM1O96005 669 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 IGHMP01871 453 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 ERCC1P07992 297 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 MMP7P09237 267 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 NAT2P11245 290 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 APEHP13798 732 aaKnown RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 ZNF26P17031 533 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 CCNOP22674 350 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 MSX2P35548 267 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 SLC9A3P48764 834 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 RPS23P62266 143 aaKnown RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 HSF2Q03933 536 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 PABPC1L2AQ5JQF8 200 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 CYB5R2Q6BCY4 276 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 GLYATQ6IB77 296 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 PODNL1Q6PEZ8 512 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 SLC25A47Q6Q0C1 308 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 MBOAT2Q6ZWT7 520 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 ARIH2OSQ8N7S6 290 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 CPEB3Q8NE35 698 aaKnown RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 ZNF519Q8TB69 540 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 NEU4Q8WWR8 484 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 FAM46AQ96IP4 442 aaKnown RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 SOX7Q9BT81 388 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 CHODLQ9H9P2 273 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 NMNAT1Q9HAN9 279 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-206ENST00000489142 CCNB1IP1Q9NPC3 277 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 FBXL3Q9UKT7 428 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 ADAM18Q9Y3Q7 739 aa12.04□□□□□ -0.48
VTI1A-206ENST00000489142 IQCMA0A1B0GVH7 501 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 GMNCA6NCL1 334 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 NDUFS8O00217 210 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 MGRN1O60291 552 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 ENTPD5O75356 428 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 LCKP06239 509 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 ZNF32P17041 273 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 PRDX6P30041 224 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 IL2RGP31785 369 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 RPL4P36578 427 aaKnown RBP12.03□□□□□ -0.48
VTI1A-206ENST00000489142 ZNF133P52736 654 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-206ENST00000489142 MRPS34P82930 218 aaKnown RBP12.03□□□□□ -0.48
VTI1A-206ENST00000489142 GLO1Q04760 184 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 TRIP10Q15642 601 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 TBC1D28Q2M2D7 210 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 FGD3Q5JSP0 725 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 OTPQ5XKR4 325 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 RGS7BPQ6MZT1 257 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-206ENST00000489142 IL17RELQ6ZVW7 336 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 CYP4Z1Q86W10 505 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 HIPK1Q86Z02 1210 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 SLC7A13Q8TCU3 470 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 UBASH3BQ8TF42 649 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 GTF3AQ92664 365 aaKnown RBP12.03□□□□□ -0.48
VTI1A-206ENST00000489142 SNX18Q96RF0 628 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 ALG12Q9BV10 488 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 SIAEQ9HAT2 523 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 MYOZ1Q9NP98 299 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-206ENST00000489142 ARL8BQ9NVJ2 186 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 NDUFAF4Q9P032 175 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 STX18Q9P2W9 335 aaKnown RBP12.03□□□□□ -0.48
VTI1A-206ENST00000489142 IL20RAQ9UHF4 553 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 RPS6KA6Q9UK32 745 aa12.03□□□□□ -0.48
VTI1A-206ENST00000489142 TRBV4-1A0A0J9YWV2 114 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 NPIPB13A6NJU9 1138 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 NPIPB4C9JG80 1138 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 NDUFAB1O14561 156 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 HPXP02790 462 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 SCG5P05408 212 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 H1F0P07305 194 aaKnown RBP12.02□□□□□ -0.49
VTI1A-206ENST00000489142 LAP3P28838 519 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 APLNRP35414 380 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 PLP2Q04941 152 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 SEC23BQ15437 767 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 TAF11Q15544 211 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 CHRFAM7AQ494W8 412 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 NRN1LQ496H8 165 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 ELFN2Q5R3F8 820 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 SPATA46Q5T0L3 261 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 RRM2BQ7LG56 351 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 DPPA2Q7Z7J5 298 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 OR52J3Q8NH60 311 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 RASD2Q96D21 266 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 MSI2Q96DH6 328 aaKnown RBP12.02□□□□□ -0.49
VTI1A-206ENST00000489142 Q96M85 177 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 KCNN2Q9H2S1 579 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 EMC7Q9NPA0 242 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 DCAF13Q9NV06 445 aaKnown RBP12.02□□□□□ -0.49
VTI1A-206ENST00000489142 TAAR3PQ9P1P4 343 aa12.02□□□□□ -0.49
VTI1A-206ENST00000489142 FBN1P35555 2871 aaKnown RBP12.01□□□□□ -0.49
VTI1A-206ENST00000489142 LOC100509620A0A075B734 347 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 LOC100289279A0A1B0GTE1 492 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 IMPA2O14732 288 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 NCR1O76036 304 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 ZNF23P17027 643 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 IGFBP5P24593 272 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 COL8A2P25067 703 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 STOMP27105 288 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 MAGEB1P43366 347 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 EVX1P49640 407 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 UCP2P55851 309 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms