RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TRBV9A0A0B4J1U6 114 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 TRAV25A0A0B4J276 109 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 A0A0B4J2A0 478 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 RBMY1BA6NDE4 496 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 RBMY1EA6NEQ0 496 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 C12orf77C9JDV5 145 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 PES1O00541 588 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 CHST1O43916 411 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 EIF3GO75821 320 aaKnown RBP eCLIP2.03□□□□□ -2.08
RFC4-213ENST00000489028 TSPAN13O95857 204 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 FGGP02679 453 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 RBMY1DP0C7P1 496 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 RBMY1A1P0DJD3 496 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 GSTM3P21266 225 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 STOMP27105 288 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 GPR6P46095 362 aaPredicted RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 NPBWR2P48146 333 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 CSNK1EP49674 416 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 SUB1P53999 127 aaKnown RBP eCLIP2.03□□□□□ -2.08
RFC4-213ENST00000489028 CRISP3P54108 245 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 SH3BGRP55822 239 aaPredicted RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 HERVK_113P61574 105 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 ACVR1Q04771 509 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 LIPEQ05469 1076 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 ECH1Q13011 328 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 PDIA2Q13087 525 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 MOBPQ13875 183 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 C16orf72Q14CZ0 275 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 MRPL23Q16540 153 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 CAVIN4Q5BKX8 364 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 XKR4Q5GH76 650 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 BEX5Q5H9J7 111 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 PPM1LQ5SGD2 360 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 PIP5KL1Q5T9C9 394 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 C1orf94Q6P1W5 598 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 ZNF620Q6ZNG0 422 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 LINC01551Q86U37 167 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 LHFPL3Q86UP9 236 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 MMAAQ8IVH4 418 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 VN1R2Q8NFZ6 395 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 OR52K1Q8NGK4 314 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 OR1S2Q8NGQ3 325 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 OR1N2Q8NGR9 330 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 FANK1Q8TC84 345 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 SLC7A13Q8TCU3 470 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 GLYATL2Q8WU03 294 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 NRGNQ92686 78 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 C8orf44Q96CB5 159 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 XPO6Q96QU8 1125 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 SLC29A1Q99808 456 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 OR51M1Q9H341 326 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 SRMSQ9H3Y6 488 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 ELOVL6Q9H5J4 265 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 TMEM165Q9HC07 324 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 MRPS30Q9NP92 439 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 FGF20Q9NP95 211 aaPredicted RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 PDP1Q9P0J1 537 aaPredicted RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 SHPKQ9UHJ6 478 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 LSM7Q9UK45 103 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 TBX21Q9UL17 535 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 TBC1D24Q9ULP9 559 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 PACSIN2Q9UNF0 486 aaPredicted RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 GOLT1BQ9Y3E0 138 aa2.03□□□□□ -2.08
RFC4-213ENST00000489028 CHTOPQ9Y3Y2 248 aaKnown RBP2.03□□□□□ -2.08
RFC4-213ENST00000489028 INSRP06213 1382 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 MAP3K15Q6ZN16 1313 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 ARPC4-TTLL3A0A0A6YYG9 625 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 KBTBD11-OT1A0A1B0GTJ5 212 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 H7C0C1 242 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 MRPS12O15235 138 aaKnown RBP2.02□□□□□ -2.09
RFC4-213ENST00000489028 EIF3HO15372 352 aaKnown RBP eCLIP2.02□□□□□ -2.09
RFC4-213ENST00000489028 SLC31A2O15432 143 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 CLIC3O95833 236 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 PLEKP08567 350 aaPredicted RBP2.02□□□□□ -2.09
RFC4-213ENST00000489028 CHTF8P0CG12 524 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 ICAM2P13598 275 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 ZNF823P16415 610 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 CRISP2P16562 243 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 BCKDHBP21953 392 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 DCKP27707 260 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 ZNF92Q03936 586 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 SELENBP1Q13228 472 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 DOC2AQ14183 400 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 GGTLC2Q14390 218 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 SF3A2Q15428 464 aaKnown RBP2.02□□□□□ -2.09
RFC4-213ENST00000489028 SHHQ15465 462 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 NRF1Q16656 503 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 KLHL40Q2TBA0 621 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 HSDL1Q3SXM5 330 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 LY6G6FQ5SQ64 297 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 PLCXD3Q63HM9 321 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 OR52W1Q6IF63 320 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 ANKRD26P1Q6NSI1 321 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 CNIH2Q6PI25 160 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 Q6ZSR3 168 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 ASCL5Q7RTU5 278 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 SAXO1Q8IYX7 474 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 PUSL1Q8N0Z8 303 aaKnown RBP2.02□□□□□ -2.09
RFC4-213ENST00000489028 JAGN1Q8N5M9 183 aa2.02□□□□□ -2.09
RFC4-213ENST00000489028 PQLC3Q8N755 202 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms