RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 RASD1Q9Y272 281 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 PCDHGB7Q9Y5F8 929 aa10.91□□□□□ -0.66
HDAC6-230ENST00000488543 SPENQ96T58 3664 aaKnown RBP10.9□□□□□ -0.66
HDAC6-230ENST00000488543 H7C1C5 153 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 J3QLW9 94 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 DCTN6O00399 190 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 OR2T1O43869 369 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 SELENOFO60613 162 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 FZD7O75084 574 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 RGS9O75916 674 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-230ENST00000488543 GLCEO94923 617 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 IGHMP01871 453 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 ARSBP15848 533 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF19P17023 458 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 NAA10P41227 235 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-230ENST00000488543 OR12D2P58182 307 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 LCN6P62502 163 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 ACTC1P68032 377 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 ACTA1P68133 377 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 BDH1Q02338 343 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 FAPQ12884 760 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 GPR176Q14439 515 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 PON3Q15166 354 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 SPINK14Q6IE38 97 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 LINC00696Q6ZRV3 163 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 TRILQ7L0X0 811 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 SLC35F2Q8IXU6 374 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 MFSD8Q8NHS3 518 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 ACOXLQ9NUZ1 547 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 BABAM2Q9NXR7 383 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 PLA2G3Q9NZ20 509 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 URB1O60287 2271 aaKnown RBP10.9□□□□□ -0.66
HDAC6-230ENST00000488543 ATMQ13315 3056 aa10.9□□□□□ -0.66
HDAC6-230ENST00000488543 A0A0G2JMM0 328 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 A0A1W2PPB8 328 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 A0A1W2PRG6 482 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 A0A1W2PRS3 328 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 FAM171A2A8MVW0 826 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 KIR3DP1A8MWS1 328 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 EFSO43281 561 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 ACKR1Q16570 336 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 BCL2L15Q5TBC7 163 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 KRT74Q7RTS7 529 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 TIGD4Q8IY51 512 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 IZUMO1Q8IYV9 350 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 DND1Q8IYX4 353 aaKnown RBP10.9□□□□□ -0.67
HDAC6-230ENST00000488543 OR4K17Q8NGC6 315 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 OR5M1Q8NGP8 315 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 OR5H6Q8NGV6 325 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 GNRHR2Q96P88 292 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 ALG12Q9BV10 488 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 POTEKPQ9BYX7 375 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 BEX1Q9HBH7 125 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 COPS3Q9UNS2 423 aa10.9□□□□□ -0.67
HDAC6-230ENST00000488543 ACACAQ13085 2346 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 MS4A18H0YCH9 400 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 PLGP00747 810 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-230ENST00000488543 HLA-DQB1P01920 261 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 OR2T7P0C7T2 308 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 CLDN20P56880 219 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 GPR85P60893 370 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 OC90Q02509 493 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-230ENST00000488543 ZP4Q12836 540 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 OR7A5Q15622 319 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 MS4A18Q3C1V0 323 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 SLC22A10Q63ZE4 541 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 LAMTOR1Q6IAA8 161 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 MZT2BQ6NZ67 158 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 PLCZ1Q86YW0 608 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 CLEC1AQ8NC01 280 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 OR2T27Q8NH04 317 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 SNAPC3Q92966 411 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 DDIT4LQ96D03 193 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 C4orf36Q96KX1 117 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 JSRP1Q96MG2 331 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-230ENST00000488543 TXNIPQ9H3M7 391 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 MRPS7Q9Y2R9 242 aaKnown RBP10.89□□□□□ -0.67
HDAC6-230ENST00000488543 HSPB11Q9Y547 144 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 LIPT2A6NK58 231 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 INMT-MINDY4F8WBC2 141 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 MT-ND5P03915 603 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 TRAPPC2P0DI81 140 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 TRAPPC2BP0DI82 140 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 THBS2P35442 1172 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 CD96P40200 585 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 RPL27P61353 136 aaKnown RBP10.89□□□□□ -0.67
HDAC6-230ENST00000488543 C19orf57Q0VDD7 668 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 AIMP2Q13155 320 aaKnown RBP10.89□□□□□ -0.67
HDAC6-230ENST00000488543 FAM205BPQ63HN1 556 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 CEACAM19Q7Z692 300 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 OR6V1Q8N148 313 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 ZNF511Q8NB15 262 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 OR6K6Q8NGW6 343 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 DEDD2Q8WXF8 326 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 HSD17B8Q92506 261 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 GCDHQ92947 438 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-230ENST00000488543 ABHD1Q96SE0 405 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 WASF3Q9UPY6 502 aa10.89□□□□□ -0.67
HDAC6-230ENST00000488543 A0A087WV48 116 aa10.88□□□□□ -0.67
HDAC6-230ENST00000488543 H3BML4 177 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms