RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 AQP1P29972 269 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 HTR1FP30939 366 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 SPAM1P38567 509 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 BDKRB1P46663 353 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 AP3M2P53677 418 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 APOC4P55056 127 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 NCBP1Q09161 790 aaKnown RBP2.79□□□□□ -1.96
ITGB1-214ENST00000488427 TATDN3Q17R31 274 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 LINC01620Q4KN68 170 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 TMEM41BQ5BJD5 291 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 ATF7IP2Q5U623 682 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 C1orf146Q5VVC0 180 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 KHDRBS2Q5VWX1 349 aaKnown RBP2.79□□□□□ -1.96
ITGB1-214ENST00000488427 Q6P435 159 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 DPY19L4Q7Z388 723 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 TPRA1Q86W33 373 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 CENPLQ8N0S6 344 aaPredicted RBP2.79□□□□□ -1.96
ITGB1-214ENST00000488427 FAM71E2Q8N5Q1 922 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 ZNF740Q8NDX6 193 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 OR52I1Q8NGK6 324 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 FBXO30Q8TB52 745 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 M1APQ8TC57 530 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 UBE2Q2Q8WVN8 375 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 STARD8Q92502 1023 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 TMEM159Q96B96 161 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 STARD4Q96DR4 205 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 ZMYND19Q96E35 227 aaPredicted RBP2.79□□□□□ -1.96
ITGB1-214ENST00000488427 WARS2Q9UGM6 360 aaKnown RBP2.79□□□□□ -1.96
ITGB1-214ENST00000488427 ZNF225Q9UK10 706 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 B9D1Q9UPM9 204 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 UBIAD1Q9Y5Z9 338 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 CACNG2Q9Y698 323 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 U3KQA8 63 aa2.79□□□□□ -1.96
ITGB1-214ENST00000488427 COL7A1Q02388 2944 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 RYR1P21817 5038 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 IGHV2-70DA0A0C4DH43 119 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 A0A0U1RQV5 110 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 NKX2-6A6NCS4 301 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 FAM47DPA6NHR8 397 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 ZNF705EA8MWA4 302 aaPredicted RBP2.78□□□□□ -1.96
ITGB1-214ENST00000488427 D6RAR5 112 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 NPIPA7E9PJI5 369 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 F8WDY8 70 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 ZBTB5O15062 677 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 RAD1O60671 282 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 ICOSLGO75144 302 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 GNA14O95837 355 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 CCNE2O96020 404 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 INSP01308 110 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 NPIPA8P0DM63 369 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 PGCP20142 388 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 DAZ2Q13117 558 aaKnown RBP2.78□□□□□ -1.96
ITGB1-214ENST00000488427 ITGB3BPQ13352 177 aaPredicted RBP2.78□□□□□ -1.96
ITGB1-214ENST00000488427 MESDQ14696 234 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 CENPPQ6IPU0 288 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 ZSCAN25Q6NSZ9 544 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 XKRXQ6PP77 449 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 CBLN3Q6UW01 205 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 UNC5DQ6UXZ4 953 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 FAM220AQ7Z4H9 259 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 TMEM150AQ86TG1 271 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 H1FOOQ8IZA3 346 aaPredicted RBP2.78□□□□□ -1.96
ITGB1-214ENST00000488427 SVOPLQ8N434 492 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 SUMF2Q8NBJ7 301 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 OR8H1Q8NGG4 311 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 NAT6Q93015 286 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 CPB2Q96IY4 423 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 CELF6Q96J87 481 aaKnown RBP2.78□□□□□ -1.96
ITGB1-214ENST00000488427 NRIP2Q9BQI9 281 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 SELENOIQ9C0D9 397 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 LHX5Q9H2C1 402 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 RWDD1Q9H446 243 aaPredicted RBP2.78□□□□□ -1.96
ITGB1-214ENST00000488427 LRTM1Q9HBL6 345 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 SGK2Q9HBY8 427 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 MRPL40Q9NQ50 206 aaKnown RBP2.78□□□□□ -1.96
ITGB1-214ENST00000488427 DAZ3Q9NR90 486 aaKnown RBP2.78□□□□□ -1.96
ITGB1-214ENST00000488427 AGPAT4Q9NRZ5 378 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 NRBP2Q9NSY0 501 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 B3GNT2Q9NY97 397 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 TREM2Q9NZC2 230 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 TBK1Q9UHD2 729 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 NPIPA1Q9UND3 350 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 FREM1Q5H8C1 2179 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 MPDZO75970 2070 aa2.78□□□□□ -1.96
ITGB1-214ENST00000488427 ROS1P08922 2347 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 A0A087WZY1 265 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 TRBV6-6A0A0A6YYG2 114 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 LOC100653049A0A140TA62 436 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 PSMB11A5LHX3 300 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 CASC3O15234 703 aaKnown RBP2.77□□□□□ -1.97
ITGB1-214ENST00000488427 MAPK13O15264 365 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 NBR2O15453 112 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 KRT34O76011 436 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 OR4Q2P0C623 313 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 GIMD1P0DJR0 217 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 FUT1P19526 365 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 NUDT1P36639 197 aa2.77□□□□□ -1.97
ITGB1-214ENST00000488427 TUFMP49411 452 aaKnown RBP2.77□□□□□ -1.97
ITGB1-214ENST00000488427 SH3BGRP55822 239 aaPredicted RBP2.77□□□□□ -1.97
ITGB1-214ENST00000488427 ZNF235Q14590 738 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms